Cow genome map
| Conread name: | uFN-UNL-P-FN-db-c-11-0-UNL.s1 |
| Conread position: | 214-395 |
| Cow position: | chr5:70720737-70720556 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 91, 29 |
| Conread position: | 215-405 |
| Cow position: | chr5:49920330-49920522 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 80, 122 |
| Conread position: | 215-412 |
| Cow position: | chr5:7393927-7393726 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 80, 165 |
| Conread position: | 215-412 |
| Cow position: | chr5:9969513-9969711 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 135, 104 |
| Conread position: | 215-412 |
| Cow position: | chr5:23742397-23742592 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 93, 105 |
| Conread position: | 215-412 |
| Cow position: | chr5:66106660-66106860 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 89, 193 |
| Conread position: | 215-412 |
| Cow position: | chr5:75573364-75573164 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 220-412 |
| Cow position: | chr5:47619557-47619366 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 221-322 |
| Cow position: | chr5:18709920-18710024 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 221-355 |
| Cow position: | chr5:69115744-69115608 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 56 |
| Conread position: | 221-376 |
| Cow position: | chr5:60969261-60969420 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 221-404 |
| Cow position: | chr5:67962418-67962598 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 89, 159 |
| Conread position: | 221-405 |
| Cow position: | chr5:64038913-64039095 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 16, 158 |
| Conread position: | 221-406 |
| Cow position: | chr5:64103972-64103784 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 88, 103 |
| Conread position: | 221-408 |
| Cow position: | chr5:37372090-37372288 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 221-412 |
| Cow position: | chr5:19914549-19914744 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 221-412 |
| Cow position: | chr5:21042932-21043122 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 88, 45 |
| Conread position: | 221-412 |
| Cow position: | chr5:21514829-21514645 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 130, 56 |
| Conread position: | 221-412 |
| Cow position: | chr5:42100024-42099841 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 221-412 |
| Cow position: | chr5:48275247-48275053 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 127 |
| Conread position: | 221-412 |
| Cow position: | chr5:70705033-70705220 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 88, 121 |
| Conread position: | 221-413 |
| Cow position: | chr5:42183379-42183183 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 221-413 |
| Cow position: | chr5:64796195-64796389 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 179 |
| Conread position: | 221-420 |
| Cow position: | chr5:63515859-63515663 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 224-408 |
| Cow position: | chr5:39800768-39800573 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 224-412 |
| Cow position: | chr5:23628481-23628671 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 85, 53 |
| Conread position: | 224-412 |
| Cow position: | chr5:29537059-29536856 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 224-412 |
| Cow position: | chr5:30204584-30204765 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 53 |
| Conread position: | 224-412 |
| Cow position: | chr5:42785587-42785396 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 87, 46 |
| Conread position: | 224-412 |
| Cow position: | chr5:47357834-47358013 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 86, 98 |
| Conread position: | 224-412 |
| Cow position: | chr5:47839955-47839765 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 63, 56 |
| Conread position: | 224-423 |
| Cow position: | chr5:42820233-42820436 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 86, 176 |
| Conread position: | 224-433 |
| Cow position: | chr5:47771864-47771653 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 38, 107 |
| Conread position: | 225-377 |
| Cow position: | chr5:9368672-9368827 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 225-377 |
| Cow position: | chr5:46273344-46273189 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 225-377 |
| Cow position: | chr5:73887935-73887780 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 225-378 |
| Cow position: | chr5:24456388-24456232 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 225-412 |
| Cow position: | chr5:25896382-25896194 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 108 |
| Conread position: | 225-423 |
| Cow position: | chr5:2441249-2441044 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 227-377 |
| Cow position: | chr5:13420983-13421136 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 232-409 |
| Cow position: | chr5:17737098-17737280 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 232-412 |
| Cow position: | chr5:29075999-29076184 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 150 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 232-413 |
| Cow position: | chr5:73480300-73480118 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 82, 59 |
| Conread position: | 233-412 |
| Cow position: | chr5:56260476-56260645 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 233-412 |
| Cow position: | chr5:72939619-72939437 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 77, 133 |
| Conread position: | 236-406 |
| Cow position: | chr5:8764338-8764513 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 236-406 |
| Cow position: | chr5:47996450-47996274 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 236-412 |
| Cow position: | chr5:18775567-18775394 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 43 |
| Conread position: | 236-412 |
| Cow position: | chr5:48135707-48135880 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 238-409 |
| Cow position: | chr5:5058500-5058665 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 238-412 |
| Cow position: | chr5:24888638-24888815 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 56, 78 |
| Conread position: | 239-412 |
| Cow position: | chr5:18585038-18585212 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 65, 38 |
| Conread position: | 244-412 |
| Cow position: | chr5:12219217-12219386 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 259-412 |
| Cow position: | chr5:18657605-18657765 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 259-412 |
| Cow position: | chr5:47991630-47991471 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.