Cow genome map
| Conread name: | uFN-UNL-P-FN-db-c-11-0-UNL.s1 |
| Conread position: | 215-409 |
| Cow position: | chrX:39528433-39528626 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 99, 32 |
| Conread position: | 215-412 |
| Cow position: | chrX:25306760-25306562 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 77, 105 |
| Conread position: | 215-412 |
| Cow position: | chrX:34827260-34827456 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 109 |
| Conread position: | 215-412 |
| Cow position: | chrX:37075037-37074844 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 220-412 |
| Cow position: | chrX:15267327-15267129 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 220-412 |
| Cow position: | chrX:47336317-47336122 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 89, 151 |
| Conread position: | 221-405 |
| Cow position: | chrX:28036831-28037005 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 100, 81 |
| Conread position: | 221-408 |
| Cow position: | chrX:31203896-31204080 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 89, 159 |
| Conread position: | 221-408 |
| Cow position: | chrX:36090427-36090616 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 88, 179 |
| Conread position: | 221-412 |
| Cow position: | chrX:5414486-5414674 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 83, 159 |
| Conread position: | 221-412 |
| Cow position: | chrX:19503370-19503562 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 61, 53 |
| Conread position: | 221-412 |
| Cow position: | chrX:32978922-32978726 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 221-412 |
| Cow position: | chrX:48016092-48015898 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 88, 150 |
| Conread position: | 221-413 |
| Cow position: | chrX:42496859-42497044 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 223-405 |
| Cow position: | chrX:44117283-44117097 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 150 |
| Conread position: | 224-406 |
| Cow position: | chrX:45892980-45893165 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 80, 146 |
| Conread position: | 224-412 |
| Cow position: | chrX:39861018-39861203 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 86, 53 |
| Conread position: | 224-412 |
| Cow position: | chrX:45769721-45769530 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 85, 146 |
| Conread position: | 224-412 |
| Cow position: | chrX:48265161-48264970 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 47, 138 |
| Conread position: | 225-366 |
| Cow position: | chrX:6393163-6393023 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 126, 94 |
| Conread position: | 225-377 |
| Cow position: | chrX:26381560-26381409 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 225-377 |
| Cow position: | chrX:42416878-42417033 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 230-409 |
| Cow position: | chrX:26463637-26463820 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 69, 24 |
| Conread position: | 232-412 |
| Cow position: | chrX:47331714-47331531 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 77, 139 |
| Conread position: | 236-412 |
| Cow position: | chrX:12649104-12649285 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 236-412 |
| Cow position: | chrX:42570665-42570494 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 55, 73 |
| Conread position: | 237-412 |
| Cow position: | chrX:29919852-29919671 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 244-412 |
| Cow position: | chrX:42467441-42467270 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 255-412 |
| Cow position: | chrX:30035993-30035828 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 258-377 |
| Cow position: | chrX:24394519-24394641 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 262-412 |
| Cow position: | chrX:17791210-17791057 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 117 |
Show alignments to all cow chromosomes.