Cow genome map
| Conread name: | unkn-03A04at7 |
| Conread position: | 11-279 |
| Cow position: | chr1:77656761-77657050 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 14, 100 |
| Conread position: | 12-263 |
| Cow position: | chr1:37421088-37420832 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 58, 97 |
| Conread position: | 14-240 |
| Cow position: | chr1:77866775-77867019 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 13, 96 |
| Conread position: | 16-292 |
| Cow position: | chr1:41517626-41517351 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 21-292 |
| Cow position: | chr1:26722434-26722150 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 21-295 |
| Cow position: | chr1:51883843-51884118 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 49, 16 |
| Conread position: | 21-295 |
| Cow position: | chr1:82369648-82369933 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 21-296 |
| Cow position: | chr1:23098865-23099151 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 27-292 |
| Cow position: | chr1:33854501-33854781 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 27-292 |
| Cow position: | chr1:69770053-69770332 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 27-292 |
| Cow position: | chr1:82479217-82479497 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 27-292 |
| Cow position: | chr1:102814707-102814987 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 27-295 |
| Cow position: | chr1:33899779-33900056 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 28-255 |
| Cow position: | chr1:88389563-88389795 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 36-295 |
| Cow position: | chr1:57759157-57759426 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 26, 233 |
| Conread position: | 37-275 |
| Cow position: | chr1:55273799-55273545 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 37-282 |
| Cow position: | chr1:11289146-11288883 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 200 |
| Conread position: | 37-282 |
| Cow position: | chr1:13438364-13438623 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 70 |
| Conread position: | 37-282 |
| Cow position: | chr1:21090708-21090969 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 35, 72 |
| Conread position: | 37-284 |
| Cow position: | chr1:51980228-51980481 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 23, 84 |
| Conread position: | 37-287 |
| Cow position: | chr1:56170203-56170468 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 37-288 |
| Cow position: | chr1:88563671-88563414 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 35, 64 |
| Conread position: | 37-292 |
| Cow position: | chr1:10725867-10726137 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:16819855-16820120 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 37-292 |
| Cow position: | chr1:18087672-18087943 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:21258356-21258088 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:28811999-28811728 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:43568267-43567994 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:46613053-46612783 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 37-292 |
| Cow position: | chr1:54472171-54471900 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:67013269-67013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 17, 62 |
| Conread position: | 37-292 |
| Cow position: | chr1:69504131-69503860 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:69671378-69671107 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:71559501-71559236 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 35, 72 |
| Conread position: | 37-292 |
| Cow position: | chr1:71794776-71795047 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:73010227-73010498 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:73440209-73440480 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:73463209-73463478 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:73565235-73564964 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:75403137-75403408 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:76878275-76878545 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:80564834-80564563 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:81308604-81308875 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:85630579-85630850 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr1:86496532-86496803 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-295 |
| Cow position: | chr1:22012717-22012446 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 23, 190 |
| Conread position: | 37-295 |
| Cow position: | chr1:24440816-24440545 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 68 |
| Conread position: | 37-295 |
| Cow position: | chr1:55044019-55043747 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 37-295 |
| Cow position: | chr1:85773451-85773723 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 33, 126 |
| Conread position: | 37-295 |
| Cow position: | chr1:89492987-89492720 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 141 |
| Conread position: | 37-295 |
| Cow position: | chr1:91902262-91902536 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 37-296 |
| Cow position: | chr1:38279497-38279219 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 23, 245 |
| Conread position: | 37-296 |
| Cow position: | chr1:53309414-53309146 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 37-296 |
| Cow position: | chr1:102552260-102552521 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 77, 37 |
| Conread position: | 38-295 |
| Cow position: | chr1:58418920-58419187 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 24, 245 |
| Conread position: | 38-296 |
| Cow position: | chr1:30033527-30033784 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 38-296 |
| Cow position: | chr1:31392050-31391785 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 33, 44 |
| Conread position: | 38-296 |
| Cow position: | chr1:50764402-50764665 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 33, 58 |
| Conread position: | 38-296 |
| Cow position: | chr1:56425157-56425428 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 38-296 |
| Cow position: | chr1:57574342-57574069 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 38-296 |
| Cow position: | chr1:79633308-79633037 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 22, 168 |
| Conread position: | 39-292 |
| Cow position: | chr1:22481415-22481144 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 39-296 |
| Cow position: | chr1:96193892-96193640 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 55, 35 |
| Conread position: | 41-219 |
| Cow position: | chr1:30440407-30440594 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 60 |
| Conread position: | 41-284 |
| Cow position: | chr1:46694660-46694401 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 41-288 |
| Cow position: | chr1:51967501-51967756 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 27, 160 |
| Conread position: | 41-292 |
| Cow position: | chr1:2764363-2764636 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 41-292 |
| Cow position: | chr1:56644631-56644376 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 41-292 |
| Cow position: | chr1:58528519-58528785 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 31, 61 |
| Conread position: | 41-292 |
| Cow position: | chr1:101833644-101833909 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 167 |
| Conread position: | 41-296 |
| Cow position: | chr1:5163094-5162821 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 41-296 |
| Cow position: | chr1:70864506-70864764 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 41-296 |
| Cow position: | chr1:99572319-99572052 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 42-296 |
| Cow position: | chr1:22789649-22789922 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 28, 185 |
| Conread position: | 43-290 |
| Cow position: | chr1:6241024-6240769 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 27, 68 |
| Conread position: | 47-236 |
| Cow position: | chr1:45021485-45021683 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 61-296 |
| Cow position: | chr1:56475275-56475514 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 72, 52 |
| Conread position: | 64-292 |
| Cow position: | chr1:61662261-61662024 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 17, 41 |
| Conread position: | 66-296 |
| Cow position: | chr1:38545436-38545203 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 50, 132 |
| Conread position: | 67-282 |
| Cow position: | chr1:100451390-100451172 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 66, 196 |
| Conread position: | 67-296 |
| Cow position: | chr1:67913363-67913595 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 98, 46 |
| Conread position: | 68-291 |
| Cow position: | chr1:16573635-16573412 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 128 |
| Conread position: | 70-292 |
| Cow position: | chr1:30065662-30065888 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 70-296 |
| Cow position: | chr1:16973828-16973598 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 71-260 |
| Cow position: | chr1:26838240-26838437 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 58, 32 |
| Conread position: | 71-295 |
| Cow position: | chr1:19441255-19441023 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 30 |
| Conread position: | 71-296 |
| Cow position: | chr1:20146700-20146930 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 71-296 |
| Cow position: | chr1:82879719-82879949 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 81 |
| Conread position: | 73-292 |
| Cow position: | chr1:98789141-98789368 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 65, 26 |
| Conread position: | 73-295 |
| Cow position: | chr1:68950694-68950922 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 73-296 |
| Cow position: | chr1:57397027-57396807 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 43 |
| Conread position: | 76-292 |
| Cow position: | chr1:4452797-4452569 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 76-296 |
| Cow position: | chr1:101008563-101008341 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 109-296 |
| Cow position: | chr1:72114462-72114658 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 110-290 |
| Cow position: | chr1:53424253-53424431 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 9, 58 |
| Conread position: | 116-292 |
| Cow position: | chr1:5013464-5013284 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 147 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 118-251 |
| Cow position: | chr1:4515389-4515251 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 118-251 |
| Cow position: | chr1:4646199-4646061 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 118-292 |
| Cow position: | chr1:15463188-15463365 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 109 |
| Conread position: | 118-292 |
| Cow position: | chr1:71792265-71792443 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 118-292 |
| Cow position: | chr1:72766702-72766524 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 118-292 |
| Cow position: | chr1:84447017-84447196 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 118-292 |
| Cow position: | chr1:87830585-87830762 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 15, 98 |
| Conread position: | 118-295 |
| Cow position: | chr1:3440298-3440479 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 15, 65 |
| Conread position: | 118-295 |
| Cow position: | chr1:31646289-31646111 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 142 |
| Conread position: | 118-295 |
| Cow position: | chr1:78290893-78291074 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 118-296 |
| Cow position: | chr1:7837426-7837245 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 140 |
| Conread position: | 118-296 |
| Cow position: | chr1:15332981-15333157 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 16, 123 |
| Conread position: | 119-295 |
| Cow position: | chr1:4276995-4277170 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 76, 121 |
| Conread position: | 119-295 |
| Cow position: | chr1:62507903-62507728 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 124-271 |
| Cow position: | chr1:40061564-40061714 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 130 |
| Conread position: | 124-289 |
| Cow position: | chr1:99117360-99117526 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 124-290 |
| Cow position: | chr1:52508279-52508110 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 124-292 |
| Cow position: | chr1:4208157-4207985 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 124-295 |
| Cow position: | chr1:7415826-7416002 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 124-295 |
| Cow position: | chr1:44079078-44078904 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 41, 106 |
| Conread position: | 129-283 |
| Cow position: | chr1:83136289-83136449 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-284 |
| Cow position: | chr1:21576889-21577048 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-287 |
| Cow position: | chr1:7746280-7746439 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 66 |
| Conread position: | 129-287 |
| Cow position: | chr1:100420945-100421108 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 36, 161 |
| Conread position: | 129-292 |
| Cow position: | chr1:3932293-3932126 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr1:7324418-7324585 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr1:8470815-8470648 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr1:10364913-10365080 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr1:17187893-17187726 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr1:20832229-20832396 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr1:29037887-29038054 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr1:83060294-83060128 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 129-292 |
| Cow position: | chr1:89234685-89234518 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-295 |
| Cow position: | chr1:42740043-42740213 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-295 |
| Cow position: | chr1:89112169-89112338 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 129-295 |
| Cow position: | chr1:100536495-100536665 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-296 |
| Cow position: | chr1:19884554-19884382 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-296 |
| Cow position: | chr1:31352280-31352115 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 35, 23 |
| Conread position: | 129-296 |
| Cow position: | chr1:57946277-57946448 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-296 |
| Cow position: | chr1:61282770-61282941 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 138 |
| Conread position: | 129-296 |
| Cow position: | chr1:72812507-72812677 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 75, 34 |
| Conread position: | 129-296 |
| Cow position: | chr1:86705485-86705654 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 72, 127 |
| Conread position: | 130-295 |
| Cow position: | chr1:94464461-94464627 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 126 |
| Conread position: | 131-292 |
| Cow position: | chr1:7196703-7196868 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 133-281 |
| Cow position: | chr1:24562403-24562253 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 136 |
| Conread position: | 133-281 |
| Cow position: | chr1:24571790-24571643 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 103, 60 |
Show alignments to all cow chromosomes.