Cow genome map
| Conread name: | unkn-03A04at7 |
| Conread position: | 11-292 |
| Cow position: | chr12:28763851-28763555 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 7, 99 |
| Conread position: | 23-296 |
| Cow position: | chr12:21946182-21946453 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 175, 15 |
| Conread position: | 27-275 |
| Cow position: | chr12:21888862-21888599 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 27-292 |
| Cow position: | chr12:22748395-22748676 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 28-292 |
| Cow position: | chr12:21452796-21452517 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 37-269 |
| Cow position: | chr12:23294424-23294670 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 37-284 |
| Cow position: | chr12:24205724-24205982 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 25, 168 |
| Conread position: | 37-284 |
| Cow position: | chr12:25148428-25148166 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 37-292 |
| Cow position: | chr12:1511574-1511305 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 127 |
| Conread position: | 37-292 |
| Cow position: | chr12:10075851-10076118 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 152 |
| Conread position: | 37-292 |
| Cow position: | chr12:15925562-15925293 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 33, 70 |
| Conread position: | 37-292 |
| Cow position: | chr12:21432530-21432800 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 37-292 |
| Cow position: | chr12:25266144-25265873 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr12:30686931-30687202 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 25, 77 |
| Conread position: | 37-292 |
| Cow position: | chr12:31027630-31027360 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 71 |
| Conread position: | 37-292 |
| Cow position: | chr12:38893553-38893824 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-295 |
| Cow position: | chr12:5110871-5110601 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 37-295 |
| Cow position: | chr12:12754967-12754694 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 37-295 |
| Cow position: | chr12:36287823-36287552 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 37-296 |
| Cow position: | chr12:8773856-8774128 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 37-296 |
| Cow position: | chr12:24557769-24558038 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 39-292 |
| Cow position: | chr12:32147438-32147169 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 31, 70 |
| Conread position: | 39-296 |
| Cow position: | chr12:48416555-48416278 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 229 |
| Conread position: | 41-283 |
| Cow position: | chr12:17969181-17969420 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 155, 33 |
| Conread position: | 41-292 |
| Cow position: | chr12:15231228-15231487 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 41-295 |
| Cow position: | chr12:47803366-47803616 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 41-296 |
| Cow position: | chr12:15939668-15939414 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 42-292 |
| Cow position: | chr12:22686692-22686947 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 18, 66 |
| Conread position: | 42-292 |
| Cow position: | chr12:31261215-31260949 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 67-296 |
| Cow position: | chr12:23159277-23159051 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 97, 46 |
| Conread position: | 67-296 |
| Cow position: | chr12:28571609-28571840 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 71-244 |
| Cow position: | chr12:39283286-39283104 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 71-296 |
| Cow position: | chr12:19871444-19871679 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 72-292 |
| Cow position: | chr12:8641984-8642212 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 62, 97 |
| Conread position: | 118-292 |
| Cow position: | chr12:42604901-42604724 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 139 |
| Conread position: | 118-295 |
| Cow position: | chr12:32088520-32088702 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 124-240 |
| Cow position: | chr12:7885594-7885475 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 93 |
| Conread position: | 124-292 |
| Cow position: | chr12:1855571-1855399 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 129-283 |
| Cow position: | chr12:35163071-35163229 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-288 |
| Cow position: | chr12:8841765-8841602 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 129-291 |
| Cow position: | chr12:3364180-3364346 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr12:1056215-1056048 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr12:2228864-2229031 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr12:21665429-21665596 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr12:25838576-25838744 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr12:34176848-34177015 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-295 |
| Cow position: | chr12:8172201-8172368 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 129-295 |
| Cow position: | chr12:21557240-21557410 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-295 |
| Cow position: | chr12:21610896-21611066 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-296 |
| Cow position: | chr12:3070148-3070322 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-296 |
| Cow position: | chr12:21075129-21075292 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 66, 37 |
Show alignments to all cow chromosomes.