Cow genome map
| Conread name: | unkn-03A04at7 |
| Conread position: | 19-282 |
| Cow position: | chr14:12858803-12858525 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 27-292 |
| Cow position: | chr14:8396938-8396658 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 37-290 |
| Cow position: | chr14:50137122-50137388 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 33, 70 |
| Conread position: | 37-291 |
| Cow position: | chr14:34370384-34370653 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 26, 73 |
| Conread position: | 37-292 |
| Cow position: | chr14:8924947-8925218 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr14:13104792-13105063 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 37-292 |
| Cow position: | chr14:19523903-19524174 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr14:31289710-31289980 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr14:31882037-31881767 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr14:34763580-34763851 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-295 |
| Cow position: | chr14:11462229-11461955 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 37-295 |
| Cow position: | chr14:13860690-13860411 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 37-295 |
| Cow position: | chr14:17762538-17762263 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 37-295 |
| Cow position: | chr14:22690044-22689770 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 37-295 |
| Cow position: | chr14:34906376-34906650 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 33, 72 |
| Conread position: | 37-295 |
| Cow position: | chr14:44367528-44367802 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 37-295 |
| Cow position: | chr14:50142172-50141899 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 37-296 |
| Cow position: | chr14:424037-424306 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 37-296 |
| Cow position: | chr14:5500785-5501053 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 37-296 |
| Cow position: | chr14:10310410-10310685 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 37-296 |
| Cow position: | chr14:12066597-12066322 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 38-292 |
| Cow position: | chr14:9811533-9811802 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 38-292 |
| Cow position: | chr14:35301175-35300921 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 126, 45 |
| Conread position: | 38-292 |
| Cow position: | chr14:40475862-40475604 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 38-295 |
| Cow position: | chr14:13581721-13581994 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 39-292 |
| Cow position: | chr14:2289106-2289369 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 162 |
| Conread position: | 39-292 |
| Cow position: | chr14:39822224-39821965 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 8, 37 |
| Conread position: | 39-295 |
| Cow position: | chr14:24895524-24895796 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 39-296 |
| Cow position: | chr14:48495094-48495361 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 6, 114 |
| Conread position: | 41-283 |
| Cow position: | chr14:31400628-31400375 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 41-292 |
| Cow position: | chr14:7646970-7647236 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 42-283 |
| Cow position: | chr14:9876426-9876172 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 26, 67 |
| Conread position: | 42-292 |
| Cow position: | chr14:17650812-17651077 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 8, 72 |
| Conread position: | 43-292 |
| Cow position: | chr14:8517373-8517631 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 66-292 |
| Cow position: | chr14:24836694-24836932 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 44, 232 |
| Conread position: | 71-296 |
| Cow position: | chr14:26496880-26496645 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 80-296 |
| Cow position: | chr14:40229629-40229843 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 84, 13 |
| Conread position: | 82-292 |
| Cow position: | chr14:37677284-37677503 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 100-294 |
| Cow position: | chr14:14420478-14420280 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 105-290 |
| Cow position: | chr14:43564383-43564576 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 155 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 31, 157 |
| Conread position: | 114-260 |
| Cow position: | chr14:11514132-11514282 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 118-290 |
| Cow position: | chr14:50121968-50122145 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 118-292 |
| Cow position: | chr14:403107-403287 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 118-295 |
| Cow position: | chr14:10349918-10349736 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 120-296 |
| Cow position: | chr14:47584824-47585004 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 46, 126 |
| Conread position: | 124-285 |
| Cow position: | chr14:46967318-46967156 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 77 |
| Conread position: | 124-296 |
| Cow position: | chr14:44382228-44382404 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 129-283 |
| Cow position: | chr14:49328926-49329085 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 66 |
| Conread position: | 129-290 |
| Cow position: | chr14:29897976-29898141 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-291 |
| Cow position: | chr14:12243434-12243599 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 129-292 |
| Cow position: | chr14:19317795-19317962 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr14:24973670-24973503 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr14:30581509-30581343 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 129-292 |
| Cow position: | chr14:40969110-40969277 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr14:46125502-46125669 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-294 |
| Cow position: | chr14:32277563-32277394 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-296 |
| Cow position: | chr14:1802157-1802322 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 129-296 |
| Cow position: | chr14:35588638-35588809 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-296 |
| Cow position: | chr14:38380229-38380067 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 132-292 |
| Cow position: | chr14:47486497-47486333 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.