Cow genome map

Conread name: unkn-03A04at7

Conread position: 6-296
Cow position: chr15:4895557-4895263 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 9, 105

Conread position: 18-296
Cow position: chr15:2928096-2928388 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 19

Conread position: 21-273
Cow position: chr15:336524-336787 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 48, 98

Conread position: 21-290
Cow position: chr15:33700345-33700628 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 49, 16

Conread position: 21-292
Cow position: chr15:6758637-6758351 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 16

Conread position: 21-295
Cow position: chr15:5197794-5198084 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 41, 88

Conread position: 27-292
Cow position: chr15:12858987-12859267 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 10

Conread position: 27-292
Cow position: chr15:33753434-33753156 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 10

Conread position: 36-296
Cow position: chr15:17215126-17214863 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 75

Conread position: 37-276
Cow position: chr15:2020141-2020381 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 210

Conread position: 37-282
Cow position: chr15:21940168-21939907 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 37-290
Cow position: chr15:25553997-25554263 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 23, 0

Conread position: 37-291
Cow position: chr15:23173214-23172953 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 74

Conread position: 37-292
Cow position: chr15:29453-29182 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr15:4769359-4769630 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 25, 72

Conread position: 37-292
Cow position: chr15:11575156-11574891 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 0

Conread position: 37-292
Cow position: chr15:14321043-14321288 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 34, 70

Conread position: 37-292
Cow position: chr15:16801129-16801400 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 35, 72

Conread position: 37-292
Cow position: chr15:22760149-22759876 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr15:50142114-50142385 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 37-295
Cow position: chr15:2015329-2015599 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 37-295
Cow position: chr15:3721278-3721011 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 32, 17

Conread position: 37-295
Cow position: chr15:5020227-5020491 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 82, 33

Conread position: 37-295
Cow position: chr15:6463928-6464194 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 203

Conread position: 37-295
Cow position: chr15:21533282-21533008 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 25, 70

Conread position: 37-296
Cow position: chr15:4219059-4218787 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 189

Conread position: 38-271
Cow position: chr15:43266964-43267204 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 165

Conread position: 38-292
Cow position: chr15:50151556-50151825 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 39-292
Cow position: chr15:6367630-6367364 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 39-295
Cow position: chr15:17193706-17193430 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 39-296
Cow position: chr15:6164236-6163974 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 94, 32

Conread position: 41-284
Cow position: chr15:67700-67448 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 67

Conread position: 41-296
Cow position: chr15:50344871-50344605 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 29, 72

Conread position: 42-292
Cow position: chr15:23560894-23561156 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 20, 67

Conread position: 44-290
Cow position: chr15:33229189-33228931 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 13

Conread position: 47-284
Cow position: chr15:5497924-5498172 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 21, 157

Conread position: 47-290
Cow position: chr15:36671040-36671285 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 147

Conread position: 59-296
Cow position: chr15:18019502-18019257 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 15, 42

Conread position: 67-284
Cow position: chr15:33455262-33455479 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 38

Conread position: 71-296
Cow position: chr15:5243150-5242924 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 94, 30

Conread position: 72-292
Cow position: chr15:51910638-51910413 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 62, 31

Conread position: 107-292
Cow position: chr15:6537925-6537737 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 118-278
Cow position: chr15:36146105-36146270 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 118-292
Cow position: chr15:20404736-20404557 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 118-295
Cow position: chr15:12442472-12442654 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 118-295
Cow position: chr15:31768603-31768421 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 118-296
Cow position: chr15:4688980-4689163 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 119-292
Cow position: chr15:44164558-44164736 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 119-292
Cow position: chr15:47842040-47842213 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 13

Conread position: 119-296
Cow position: chr15:52390863-52390674 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 124-283
Cow position: chr15:6120333-6120496 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 124-295
Cow position: chr15:8753815-8753989 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 129-290
Cow position: chr15:32065330-32065165 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 129-291
Cow position: chr15:17295959-17296124 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 57

Conread position: 129-291
Cow position: chr15:31269914-31269749 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 91

Conread position: 129-292
Cow position: chr15:13174-13007 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 129-292
Cow position: chr15:2590362-2590522 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 33

Conread position: 129-292
Cow position: chr15:4122742-4122909 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 129-292
Cow position: chr15:9620442-9620275 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 129-292
Cow position: chr15:44576357-44576524 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 129-295
Cow position: chr15:1329117-1329279 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 102, 0

Conread position: 129-295
Cow position: chr15:4629287-4629117 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 129-295
Cow position: chr15:4933344-4933514 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 129-295
Cow position: chr15:7578120-7578290 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 129-295
Cow position: chr15:17773390-17773220 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 129-295
Cow position: chr15:25132921-25133091 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 129-295
Cow position: chr15:41793371-41793201 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 129-296
Cow position: chr15:45292277-45292448 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.