Cow genome map
| Conread name: | unkn-03A04at7 |
| Conread position: | 21-296 |
| Cow position: | chr16:4973033-4972745 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 21-296 |
| Cow position: | chr16:45608906-45609191 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 49, 92 |
| Conread position: | 27-292 |
| Cow position: | chr16:15485289-15485565 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 27-292 |
| Cow position: | chr16:23711789-23711509 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 27-292 |
| Cow position: | chr16:28193802-28193523 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 27-292 |
| Cow position: | chr16:41575752-41576021 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 91, 10 |
| Conread position: | 28-292 |
| Cow position: | chr16:24988005-24987726 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 36-292 |
| Cow position: | chr16:29158129-29158390 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 36-296 |
| Cow position: | chr16:41036520-41036246 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 31, 227 |
| Conread position: | 37-211 |
| Cow position: | chr16:43669-43856 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 37-278 |
| Cow position: | chr16:12535441-12535190 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 72 |
| Conread position: | 37-284 |
| Cow position: | chr16:26500170-26500416 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 37-291 |
| Cow position: | chr16:25042559-25042833 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 37-292 |
| Cow position: | chr16:2960186-2960457 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr16:4426598-4426868 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 37-292 |
| Cow position: | chr16:6677228-6677499 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 69 |
| Conread position: | 37-292 |
| Cow position: | chr16:12485793-12485522 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr16:18212688-18212417 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 37-292 |
| Cow position: | chr16:18651075-18650806 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 70 |
| Conread position: | 37-292 |
| Cow position: | chr16:18975375-18975646 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr16:22799197-22798926 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr16:23533492-23533222 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 37-292 |
| Cow position: | chr16:24637007-24636737 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 33, 241 |
| Conread position: | 37-292 |
| Cow position: | chr16:25879823-25880094 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr16:29093628-29093899 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 32, 173 |
| Conread position: | 37-292 |
| Cow position: | chr16:36246980-36247247 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 25, 202 |
| Conread position: | 37-292 |
| Cow position: | chr16:51401040-51400783 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 33, 74 |
| Conread position: | 37-295 |
| Cow position: | chr16:839788-840051 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 33, 68 |
| Conread position: | 37-295 |
| Cow position: | chr16:5525592-5525318 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-295 |
| Cow position: | chr16:14039932-14040206 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 25, 74 |
| Conread position: | 37-295 |
| Cow position: | chr16:26627259-26627533 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 37-296 |
| Cow position: | chr16:193428-193156 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 37-296 |
| Cow position: | chr16:5665608-5665883 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-296 |
| Cow position: | chr16:49219442-49219171 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 25, 75 |
| Conread position: | 38-290 |
| Cow position: | chr16:49743017-49742755 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 38-296 |
| Cow position: | chr16:599934-600202 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 38-296 |
| Cow position: | chr16:20377961-20378227 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 39-295 |
| Cow position: | chr16:3769502-3769227 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 41-254 |
| Cow position: | chr16:20201582-20201813 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 41-295 |
| Cow position: | chr16:49516272-49516000 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 24, 121 |
| Conread position: | 41-295 |
| Cow position: | chr16:52856324-52856065 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 42-292 |
| Cow position: | chr16:5632497-5632235 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 64 |
| Conread position: | 42-292 |
| Cow position: | chr16:20204516-20204776 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 60 |
| Conread position: | 42-292 |
| Cow position: | chr16:23065522-23065781 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 121 |
| Conread position: | 44-285 |
| Cow position: | chr16:4398771-4399026 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 18, 232 |
| Conread position: | 47-296 |
| Cow position: | chr16:7155121-7155382 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 64 |
| Conread position: | 58-292 |
| Cow position: | chr16:15369533-15369769 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 106, 15 |
| Conread position: | 62-278 |
| Cow position: | chr16:5416736-5416512 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 72-296 |
| Cow position: | chr16:45704245-45704016 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 73-296 |
| Cow position: | chr16:25157843-25157624 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 163, 26 |
| Conread position: | 81-288 |
| Cow position: | chr16:20634655-20634452 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 118-295 |
| Cow position: | chr16:32118178-32118360 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 123-292 |
| Cow position: | chr16:13988895-13989061 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 124-292 |
| Cow position: | chr16:48341602-48341431 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 129-286 |
| Cow position: | chr16:54703107-54703268 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr16:8883544-8883711 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr16:23773064-23772897 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr16:27593211-27593046 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 127 |
| Conread position: | 129-295 |
| Cow position: | chr16:23403425-23403594 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 128 |
| Conread position: | 129-296 |
| Cow position: | chr16:2233115-2232944 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 129-296 |
| Cow position: | chr16:4711978-4712154 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-296 |
| Cow position: | chr16:25173851-25174021 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 129-296 |
| Cow position: | chr16:54228677-54228504 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.