Cow genome map
| Conread name: | unkn-03A04at7 |
| Conread position: | 21-292 |
| Cow position: | chr20:32351851-32352125 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 37-281 |
| Cow position: | chr20:14511954-14512214 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 37-282 |
| Cow position: | chr20:26738036-26738297 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 37-284 |
| Cow position: | chr20:35112290-35112551 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 37-290 |
| Cow position: | chr20:13954883-13955152 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 33, 47 |
| Conread position: | 37-292 |
| Cow position: | chr20:826039-826310 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 37-292 |
| Cow position: | chr20:9223111-9223382 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr20:13304039-13303768 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr20:20439710-20439439 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr20:22060918-22060648 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 35, 263 |
| Conread position: | 37-292 |
| Cow position: | chr20:24568010-24567742 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 33, 72 |
| Conread position: | 37-292 |
| Cow position: | chr20:37154708-37154436 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 73 |
| Conread position: | 37-292 |
| Cow position: | chr20:42254774-42254515 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 37-293 |
| Cow position: | chr20:5269772-5269503 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 33, 74 |
| Conread position: | 37-295 |
| Cow position: | chr20:8099046-8099307 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 122 |
| Conread position: | 37-295 |
| Cow position: | chr20:14327355-14327083 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 71 |
| Conread position: | 37-295 |
| Cow position: | chr20:30689135-30689405 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 37-296 |
| Cow position: | chr20:10035480-10035216 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 37-296 |
| Cow position: | chr20:10921664-10921392 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 37-296 |
| Cow position: | chr20:12332942-12333209 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 25, 166 |
| Conread position: | 38-275 |
| Cow position: | chr20:33247045-33246800 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 38-283 |
| Cow position: | chr20:19845036-19845296 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 69 |
| Conread position: | 38-292 |
| Cow position: | chr20:22048626-22048896 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 38-295 |
| Cow position: | chr20:14211123-14210845 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 69 |
| Conread position: | 38-295 |
| Cow position: | chr20:35159325-35159058 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 71 |
| Conread position: | 38-296 |
| Cow position: | chr20:20935870-20935603 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 39-277 |
| Cow position: | chr20:34643278-34643524 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 32, 70 |
| Conread position: | 40-292 |
| Cow position: | chr20:30479370-30479639 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 32, 69 |
| Conread position: | 41-296 |
| Cow position: | chr20:7568701-7568439 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 41-296 |
| Cow position: | chr20:7593188-7592925 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 42-296 |
| Cow position: | chr20:20731530-20731793 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 43-295 |
| Cow position: | chr20:2654538-2654788 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 90, 27 |
| Conread position: | 58-295 |
| Cow position: | chr20:5575573-5575804 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 48 |
| Conread position: | 71-296 |
| Cow position: | chr20:9536203-9536428 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 94, 32 |
| Conread position: | 71-296 |
| Cow position: | chr20:10839155-10838930 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 35, 130 |
| Conread position: | 71-296 |
| Cow position: | chr20:19145933-19146162 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 74, 32 |
| Conread position: | 118-292 |
| Cow position: | chr20:6135640-6135461 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 118-292 |
| Cow position: | chr20:14836538-14836715 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 15, 145 |
| Conread position: | 118-292 |
| Cow position: | chr20:19352718-19352548 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 15, 77 |
| Conread position: | 118-295 |
| Cow position: | chr20:16515674-16515856 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 118-296 |
| Cow position: | chr20:9589126-9589312 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 119-292 |
| Cow position: | chr20:31000550-31000726 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 14, 126 |
| Conread position: | 120-292 |
| Cow position: | chr20:21768260-21768084 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 124-275 |
| Cow position: | chr20:34231513-34231357 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 124-292 |
| Cow position: | chr20:29285251-29285078 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 129-290 |
| Cow position: | chr20:32451992-32451827 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr20:18092537-18092372 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 98 |
| Conread position: | 129-292 |
| Cow position: | chr20:26052990-26052823 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-295 |
| Cow position: | chr20:6476870-6477024 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 36, 66 |
| Conread position: | 129-295 |
| Cow position: | chr20:9339377-9339546 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 129-295 |
| Cow position: | chr20:10405057-10405227 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-295 |
| Cow position: | chr20:12694665-12694837 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-296 |
| Cow position: | chr20:11454240-11454069 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-296 |
| Cow position: | chr20:21338739-21338580 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 65 |
| Conread position: | 134-284 |
| Cow position: | chr20:39375794-39375642 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 61, 75 |
Show alignments to all cow chromosomes.