Cow genome map
| Conread name: | unkn-03A04at7 |
| Conread position: | 12-283 |
| Cow position: | chr24:30893606-30893324 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 21-292 |
| Cow position: | chr24:33122194-33122479 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 27-292 |
| Cow position: | chr24:25372376-25372655 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 27-292 |
| Cow position: | chr24:40272120-40272396 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 27-292 |
| Cow position: | chr24:40428421-40428141 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 31-292 |
| Cow position: | chr24:17310140-17309872 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 24 |
| Conread position: | 37-275 |
| Cow position: | chr24:13496566-13496820 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-278 |
| Cow position: | chr24:25439483-25439743 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 25, 177 |
| Conread position: | 37-284 |
| Cow position: | chr24:6524279-6524541 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 37-287 |
| Cow position: | chr24:36779553-36779819 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 37-291 |
| Cow position: | chr24:11104870-11104600 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr24:7960234-7959963 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr24:11208325-11208054 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr24:14250301-14250031 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 37-292 |
| Cow position: | chr24:16908585-16908850 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 24, 61 |
| Conread position: | 37-292 |
| Cow position: | chr24:17161696-17161425 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-292 |
| Cow position: | chr24:22953844-22954115 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 37-292 |
| Cow position: | chr24:30681840-30681580 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 63, 33 |
| Conread position: | 37-292 |
| Cow position: | chr24:31067763-31067492 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 35, 72 |
| Conread position: | 37-292 |
| Cow position: | chr24:38296338-38296609 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-295 |
| Cow position: | chr24:3793764-3794038 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 37-295 |
| Cow position: | chr24:6035899-6035625 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 37-295 |
| Cow position: | chr24:12348111-12347838 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 37-295 |
| Cow position: | chr24:22047787-22047513 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 33, 72 |
| Conread position: | 37-295 |
| Cow position: | chr24:38588064-38588338 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 37-296 |
| Cow position: | chr24:16056576-16056308 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 38-295 |
| Cow position: | chr24:6442721-6442993 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 23, 231 |
| Conread position: | 39-284 |
| Cow position: | chr24:36721728-36721989 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 31, 258 |
| Conread position: | 39-290 |
| Cow position: | chr24:5929063-5929330 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 39-295 |
| Cow position: | chr24:40519319-40519057 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 203 |
| Conread position: | 39-296 |
| Cow position: | chr24:17566134-17566401 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 39-296 |
| Cow position: | chr24:36036542-36036274 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 33, 163 |
| Conread position: | 41-292 |
| Cow position: | chr24:6415448-6415715 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 21, 74 |
| Conread position: | 41-292 |
| Cow position: | chr24:29179652-29179913 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 27, 134 |
| Conread position: | 41-295 |
| Cow position: | chr24:43634400-43634667 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 41-296 |
| Cow position: | chr24:28336771-28336506 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 80 |
| Conread position: | 41-296 |
| Cow position: | chr24:32823836-32823565 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 44-269 |
| Cow position: | chr24:36556290-36556059 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 44-282 |
| Cow position: | chr24:25992157-25991912 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 44-289 |
| Cow position: | chr24:14745653-14745905 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 63-296 |
| Cow position: | chr24:34760822-34761066 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 71-292 |
| Cow position: | chr24:30765646-30765876 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 67, 10 |
| Conread position: | 73-296 |
| Cow position: | chr24:12991105-12991333 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 143 |
| Conread position: | 94-283 |
| Cow position: | chr24:6542570-6542369 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 13, 192 |
| Conread position: | 100-295 |
| Cow position: | chr24:33053664-33053465 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 18, 63 |
| Conread position: | 118-284 |
| Cow position: | chr24:8431746-8431912 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 47, 72 |
| Conread position: | 118-292 |
| Cow position: | chr24:7404543-7404369 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 15, 81 |
| Conread position: | 129-292 |
| Cow position: | chr24:15372161-15372325 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 122 |
| Conread position: | 129-292 |
| Cow position: | chr24:27345510-27345343 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-292 |
| Cow position: | chr24:27762629-27762799 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 36, 49 |
| Conread position: | 129-295 |
| Cow position: | chr24:36028129-36027959 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 130-290 |
| Cow position: | chr24:25424077-25424239 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 44 |
Show alignments to all cow chromosomes.