Cow genome map

Conread name: unkn-03A04at7

Conread position: 15-295
Cow position: chr6:7215938-7216234 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 47, 94

Conread position: 19-291
Cow position: chr6:51673919-51674201 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 51, 154

Conread position: 21-292
Cow position: chr6:35416823-35416538 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 84

Conread position: 27-282
Cow position: chr6:328207-327937 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 10

Conread position: 27-289
Cow position: chr6:33950004-33949727 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 10

Conread position: 27-292
Cow position: chr6:11401476-11401756 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 10

Conread position: 27-292
Cow position: chr6:26667868-26667589 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 10

Conread position: 27-292
Cow position: chr6:56451939-56451659 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 11

Conread position: 27-295
Cow position: chr6:56925889-56926172 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 35, 10

Conread position: 28-292
Cow position: chr6:45975656-45975935 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 9

Conread position: 37-270
Cow position: chr6:49761635-49761877 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 22, 81

Conread position: 37-282
Cow position: chr6:36230361-36230100 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 37-284
Cow position: chr6:33508415-33508674 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 70

Conread position: 37-288
Cow position: chr6:45901827-45901560 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 37-290
Cow position: chr6:4274235-4274487 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 213

Conread position: 37-290
Cow position: chr6:10236361-10236626 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 25, 74

Conread position: 37-292
Cow position: chr6:6034632-6034363 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 240

Conread position: 37-292
Cow position: chr6:7448660-7448931 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr6:7467485-7467215 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 35, 127

Conread position: 37-292
Cow position: chr6:13308231-13307962 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 37-292
Cow position: chr6:17386688-17386959 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 37-292
Cow position: chr6:22043843-22043573 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 72

Conread position: 37-292
Cow position: chr6:28001226-28000960 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 67

Conread position: 37-292
Cow position: chr6:28185154-28184884 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 232

Conread position: 37-292
Cow position: chr6:31913010-31912739 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr6:35704349-35704081 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 57

Conread position: 37-292
Cow position: chr6:37387743-37388002 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 66

Conread position: 37-292
Cow position: chr6:39912489-39912758 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 37-292
Cow position: chr6:40251632-40251364 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 70

Conread position: 37-292
Cow position: chr6:45479923-45479652 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr6:45937456-45937715 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 96, 37

Conread position: 37-292
Cow position: chr6:53537241-53537512 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr6:60379328-60379599 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr6:67553397-67553668 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 72

Conread position: 37-294
Cow position: chr6:58605695-58605968 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 188

Conread position: 37-295
Cow position: chr6:6182543-6182287 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 67

Conread position: 37-295
Cow position: chr6:6471768-6471497 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 37-295
Cow position: chr6:16050127-16049854 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 37-295
Cow position: chr6:17112000-17111727 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 37-295
Cow position: chr6:23879891-23879620 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 219

Conread position: 37-295
Cow position: chr6:27365340-27365610 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 74

Conread position: 37-295
Cow position: chr6:55593235-55593509 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 37-296
Cow position: chr6:10681160-10681424 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 77, 0

Conread position: 37-296
Cow position: chr6:51717720-51717997 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 37-296
Cow position: chr6:51876930-51877194 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 33, 70

Conread position: 38-221
Cow position: chr6:25357695-25357503 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 75

Conread position: 38-292
Cow position: chr6:13314864-13314594 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 75

Conread position: 38-295
Cow position: chr6:1274679-1274415 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 73

Conread position: 38-296
Cow position: chr6:9738088-9737817 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 24, 73

Conread position: 39-260
Cow position: chr6:14851579-14851346 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 71

Conread position: 39-292
Cow position: chr6:2618399-2618131 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 31, 230

Conread position: 39-292
Cow position: chr6:53543316-53543047 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 39-295
Cow position: chr6:17556503-17556234 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 39-295
Cow position: chr6:28102701-28102434 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 212

Conread position: 41-292
Cow position: chr6:9322172-9322436 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 29, 80

Conread position: 41-295
Cow position: chr6:40031222-40031474 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 32, 12

Conread position: 41-295
Cow position: chr6:43778875-43779130 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 61

Conread position: 42-292
Cow position: chr6:16624946-16625216 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 21, 0

Conread position: 42-292
Cow position: chr6:55474476-55474742 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 69

Conread position: 42-296
Cow position: chr6:53672505-53672773 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 26, 0

Conread position: 44-290
Cow position: chr6:34030450-34030689 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 121, 41

Conread position: 44-296
Cow position: chr6:33300837-33301108 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 47-290
Cow position: chr6:12388279-12388028 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 73

Conread position: 48-274
Cow position: chr6:52557469-52557233 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 22, 59

Conread position: 67-292
Cow position: chr6:19044416-19044639 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 6

Conread position: 70-296
Cow position: chr6:45792941-45793170 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 60, 33

Conread position: 71-287
Cow position: chr6:59596448-59596676 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 114-281
Cow position: chr6:47171316-47171487 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 117-290
Cow position: chr6:12352097-12352270 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 78

Conread position: 117-295
Cow position: chr6:6340280-6340461 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 118-282
Cow position: chr6:28160666-28160835 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 118-292
Cow position: chr6:10612089-10612266 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 118-292
Cow position: chr6:18912477-18912299 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 137

Conread position: 118-292
Cow position: chr6:21711963-21712142 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 118-292
Cow position: chr6:28136009-28136187 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 118-295
Cow position: chr6:63041072-63040894 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 74

Conread position: 119-296
Cow position: chr6:47025311-47025495 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 172

Conread position: 129-245
Cow position: chr6:61632402-61632522 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 129-283
Cow position: chr6:16418413-16418255 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 129-290
Cow position: chr6:3987787-3987622 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 129-291
Cow position: chr6:52065852-52065687 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 161

Conread position: 129-292
Cow position: chr6:6568962-6568798 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 128

Conread position: 129-292
Cow position: chr6:12971665-12971832 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 129-292
Cow position: chr6:17773255-17773422 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 129-292
Cow position: chr6:20581507-20581340 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 129-292
Cow position: chr6:42897456-42897623 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 129-292
Cow position: chr6:57521444-57521611 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 129-292
Cow position: chr6:63715007-63714840 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 129-295
Cow position: chr6:53461910-53461740 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 129-296
Cow position: chr6:39136773-39136938 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 66

Conread position: 132-292
Cow position: chr6:41233196-41233359 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 133-294
Cow position: chr6:6524971-6525131 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 58

Conread position: 134-296
Cow position: chr6:539411-539577 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 61, 0

Show alignments to all cow chromosomes.