Cow genome map

Conread name: unkn-03A04at7

Conread position: 21-292
Cow position: chr9:873735-874017 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 16

Conread position: 26-296
Cow position: chr9:46670013-46670296 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 96

Conread position: 27-284
Cow position: chr9:8282183-8281913 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 11

Conread position: 27-292
Cow position: chr9:28681285-28681565 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 10

Conread position: 27-292
Cow position: chr9:39303468-39303188 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 10

Conread position: 27-292
Cow position: chr9:60409487-60409767 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 10

Conread position: 37-237
Cow position: chr9:58747724-58747513 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 82

Conread position: 37-278
Cow position: chr9:9199190-9199441 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 33, 134

Conread position: 37-291
Cow position: chr9:7830809-7830542 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 35, 137

Conread position: 37-292
Cow position: chr9:174679-174409 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr9:382795-382529 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 72

Conread position: 37-292
Cow position: chr9:1519685-1519946 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 75

Conread position: 37-292
Cow position: chr9:1998202-1997935 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr9:3052359-3052630 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 37-292
Cow position: chr9:5430560-5430831 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 178
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr9:5452546-5452275 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr9:9210237-9210508 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr9:21461560-21461825 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 68

Conread position: 37-292
Cow position: chr9:31417422-31417151 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 72

Conread position: 37-292
Cow position: chr9:32972461-32972731 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 72

Conread position: 37-292
Cow position: chr9:33843417-33843688 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 25, 72

Conread position: 37-292
Cow position: chr9:36829958-36829687 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr9:37253498-37253769 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr9:43494142-43494413 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr9:43496228-43496499 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr9:44168683-44168956 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 35, 86

Conread position: 37-292
Cow position: chr9:44202986-44202715 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 72

Conread position: 37-292
Cow position: chr9:46627405-46627676 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 37-292
Cow position: chr9:54459408-54459137 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 72

Conread position: 37-295
Cow position: chr9:2834906-2834633 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 23, 197

Conread position: 37-295
Cow position: chr9:22803558-22803283 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 21, 71

Conread position: 37-295
Cow position: chr9:30675169-30675442 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 25, 127

Conread position: 37-295
Cow position: chr9:40316230-40316502 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 25, 72

Conread position: 37-295
Cow position: chr9:53776787-53777059 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 25, 72

Conread position: 37-295
Cow position: chr9:54413515-54413242 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 72

Conread position: 37-296
Cow position: chr9:2222757-2223032 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 125

Conread position: 37-296
Cow position: chr9:3806690-3806963 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 37-296
Cow position: chr9:37097700-37097972 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 33, 66

Conread position: 41-292
Cow position: chr9:2284782-2285046 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 61

Conread position: 41-292
Cow position: chr9:28774169-28773905 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 29, 73

Conread position: 41-295
Cow position: chr9:51159943-51160210 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 27, 13

Conread position: 41-296
Cow position: chr9:42902337-42902071 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 29, 65

Conread position: 42-292
Cow position: chr9:34567747-34568008 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 65

Conread position: 42-296
Cow position: chr9:6979301-6979567 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 28, 98

Conread position: 42-296
Cow position: chr9:25974884-25974621 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 68

Conread position: 43-295
Cow position: chr9:9515771-9516031 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 22, 78

Conread position: 46-296
Cow position: chr9:33068397-33068128 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 71-296
Cow position: chr9:7458588-7458351 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 145

Conread position: 71-296
Cow position: chr9:49981638-49981865 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 34, 121

Conread position: 71-296
Cow position: chr9:59540579-59540800 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 98

Conread position: 72-296
Cow position: chr9:5887253-5887027 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 174

Conread position: 73-296
Cow position: chr9:33999375-33999601 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 92, 30

Conread position: 111-296
Cow position: chr9:51556147-51556336 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 113-296
Cow position: chr9:26055212-26055399 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 52, 35

Conread position: 113-296
Cow position: chr9:49073882-49073694 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 114-292
Cow position: chr9:5030753-5030566 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 117-292
Cow position: chr9:63563605-63563785 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 118-292
Cow position: chr9:28785530-28785707 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 118-295
Cow position: chr9:3061772-3061955 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 118-295
Cow position: chr9:12378634-12378813 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 117

Conread position: 119-292
Cow position: chr9:3222658-3222829 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 45

Conread position: 119-296
Cow position: chr9:2495553-2495372 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 48, 99

Conread position: 120-296
Cow position: chr9:9818064-9817881 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 121-283
Cow position: chr9:62074921-62075087 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 129-290
Cow position: chr9:16639472-16639637 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 129-290
Cow position: chr9:23421784-23421946 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 85

Conread position: 129-292
Cow position: chr9:216813-216646 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 129-292
Cow position: chr9:1983569-1983734 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 128

Conread position: 129-292
Cow position: chr9:10857231-10857397 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 129-292
Cow position: chr9:18243785-18243618 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 129-292
Cow position: chr9:30186904-30187070 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 36, 53

Conread position: 129-292
Cow position: chr9:30281818-30281654 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 30

Conread position: 129-292
Cow position: chr9:35565341-35565174 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 129-292
Cow position: chr9:37908045-37908212 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 129-292
Cow position: chr9:42053332-42053165 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 129-292
Cow position: chr9:50840630-50840797 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 129-292
Cow position: chr9:52001912-52001745 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 129-292
Cow position: chr9:54995833-54995995 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 61

Conread position: 129-292
Cow position: chr9:64054644-64054810 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 129-295
Cow position: chr9:772050-771880 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 129-295
Cow position: chr9:22361953-22361784 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 129-296
Cow position: chr9:29193372-29193202 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 149

Conread position: 129-296
Cow position: chr9:34900675-34900839 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 66, 85

Conread position: 129-296
Cow position: chr9:61845703-61845874 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 130-281
Cow position: chr9:825704-825551 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 9

Conread position: 130-294
Cow position: chr9:11312273-11312432 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 64

Conread position: 132-292
Cow position: chr9:49259306-49259142 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.