Cow genome map
| Conread name: | unkn-08B04at3 |
| Conread position: | 445-606 |
| Cow position: | chr11:8244273-8244436 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 445-606 |
| Cow position: | chr11:71329210-71329373 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 445-621 |
| Cow position: | chr11:4027985-4027810 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 451-604 |
| Cow position: | chr11:9736381-9736225 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 451-604 |
| Cow position: | chr11:20921174-20921018 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 451-604 |
| Cow position: | chr11:57628475-57628319 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 451-609 |
| Cow position: | chr11:12358850-12358693 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 109 |
| Conread position: | 451-609 |
| Cow position: | chr11:85394237-85394079 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 458-604 |
| Cow position: | chr11:17108105-17107959 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 468-604 |
| Cow position: | chr11:37477529-37477392 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 469-606 |
| Cow position: | chr11:26125341-26125202 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 469-637 |
| Cow position: | chr11:30125655-30125494 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 113, 76 |
| Conread position: | 470-604 |
| Cow position: | chr11:5343625-5343490 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 470-604 |
| Cow position: | chr11:19064657-19064522 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 470-604 |
| Cow position: | chr11:36744588-36744453 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 470-604 |
| Cow position: | chr11:63659989-63659854 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 470-604 |
| Cow position: | chr11:67450090-67450226 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 470-607 |
| Cow position: | chr11:21466669-21466807 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 470-609 |
| Cow position: | chr11:15983216-15983356 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 470-609 |
| Cow position: | chr11:52418980-52419120 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 470-609 |
| Cow position: | chr11:53287862-53287723 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 112, 93 |
| Conread position: | 470-609 |
| Cow position: | chr11:54209211-54209349 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 88, 116 |
| Conread position: | 470-611 |
| Cow position: | chr11:32450460-32450602 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 470-637 |
| Cow position: | chr11:17220629-17220467 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 61 |
| Conread position: | 470-637 |
| Cow position: | chr11:28230156-28230000 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 472-609 |
| Cow position: | chr11:7113192-7113328 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 111, 25 |
| Conread position: | 473-609 |
| Cow position: | chr11:23876900-23877038 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 474-599 |
| Cow position: | chr11:44157639-44157513 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 474-606 |
| Cow position: | chr11:10089930-10090063 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 474-637 |
| Cow position: | chr11:44496001-44495844 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 84, 100 |
| Conread position: | 475-606 |
| Cow position: | chr11:46962819-46962692 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 110, 53 |
| Conread position: | 475-606 |
| Cow position: | chr11:77235363-77235495 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 475-607 |
| Cow position: | chr11:9659802-9659669 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 475-607 |
| Cow position: | chr11:37492051-37491919 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 111, 70 |
| Conread position: | 475-607 |
| Cow position: | chr11:44860927-44860799 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 104, 53 |
| Conread position: | 475-637 |
| Cow position: | chr11:9157828-9157671 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 107, 134 |
| Conread position: | 475-637 |
| Cow position: | chr11:15998492-15998649 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 107, 134 |
| Conread position: | 475-637 |
| Cow position: | chr11:37065526-37065367 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 479-604 |
| Cow position: | chr11:3492612-3492738 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 479-604 |
| Cow position: | chr11:67846967-67846844 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 479-606 |
| Cow position: | chr11:19102885-19102757 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-606 |
| Cow position: | chr11:37093460-37093332 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-606 |
| Cow position: | chr11:77728926-77728798 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 479-607 |
| Cow position: | chr11:8887551-8887426 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 479-609 |
| Cow position: | chr11:4271268-4271139 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 103, 66 |
| Conread position: | 479-609 |
| Cow position: | chr11:10847046-10847177 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-609 |
| Cow position: | chr11:28054994-28054867 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 104, 49 |
| Conread position: | 479-609 |
| Cow position: | chr11:29669027-29668896 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-609 |
| Cow position: | chr11:38835815-38835683 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 479-609 |
| Cow position: | chr11:41171091-41170960 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-609 |
| Cow position: | chr11:43515029-43514898 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 479-611 |
| Cow position: | chr11:4041470-4041337 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 479-637 |
| Cow position: | chr11:8282678-8282831 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 80, 129 |
| Conread position: | 479-637 |
| Cow position: | chr11:10210361-10210209 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 108 |
| Conread position: | 481-609 |
| Cow position: | chr11:58133973-58134102 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 482-606 |
| Cow position: | chr11:64045602-64045727 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 498-637 |
| Cow position: | chr11:47761310-47761174 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 65, 112 |
| Conread position: | 500-635 |
| Cow position: | chr11:40776920-40776790 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 82, 109 |
Show alignments to all cow chromosomes.