Cow genome map
| Conread name: | unkn-08B04at3 |
| Conread position: | 444-578 |
| Cow position: | chr16:10204254-10204120 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 445-609 |
| Cow position: | chr16:16276342-16276178 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 26, 36 |
| Conread position: | 451-602 |
| Cow position: | chr16:4303302-4303156 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 451-602 |
| Cow position: | chr16:24881521-24881369 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 451-604 |
| Cow position: | chr16:5918653-5918806 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 451-604 |
| Cow position: | chr16:6942791-6942947 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 451-604 |
| Cow position: | chr16:25187810-25187966 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 451-604 |
| Cow position: | chr16:32605996-32606152 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 451-606 |
| Cow position: | chr16:1430396-1430549 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 128, 17 |
| Conread position: | 451-606 |
| Cow position: | chr16:25440787-25440943 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 451-606 |
| Cow position: | chr16:25458302-25458146 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 451-609 |
| Cow position: | chr16:40297007-40296850 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 451-612 |
| Cow position: | chr16:1568285-1568124 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 29, 25 |
| Conread position: | 451-637 |
| Cow position: | chr16:6549353-6549174 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 131, 103 |
| Conread position: | 470-609 |
| Cow position: | chr16:836218-836357 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 112, 81 |
| Conread position: | 470-609 |
| Cow position: | chr16:10437431-10437571 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 470-609 |
| Cow position: | chr16:28171171-28171034 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 470-609 |
| Cow position: | chr16:29032348-29032487 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 470-637 |
| Cow position: | chr16:42740230-42740072 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 110, 77 |
| Conread position: | 470-637 |
| Cow position: | chr16:56551318-56551476 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 110, 18 |
| Conread position: | 473-609 |
| Cow position: | chr16:15183995-15184132 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 474-609 |
| Cow position: | chr16:28471902-28471766 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 474-609 |
| Cow position: | chr16:31592712-31592576 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 474-609 |
| Cow position: | chr16:49257391-49257254 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 475-607 |
| Cow position: | chr16:29676111-29675984 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 107, 38 |
| Conread position: | 475-607 |
| Cow position: | chr16:36282594-36282727 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 475-607 |
| Cow position: | chr16:39820829-39820958 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 52 |
| Conread position: | 476-637 |
| Cow position: | chr16:10808351-10808505 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 102, 78 |
| Conread position: | 479-602 |
| Cow position: | chr16:20255112-20254990 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 103, 75 |
| Conread position: | 479-606 |
| Cow position: | chr16:43898070-43897942 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-609 |
| Cow position: | chr16:2411773-2411641 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 479-609 |
| Cow position: | chr16:5483520-5483651 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-609 |
| Cow position: | chr16:8816907-8816776 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-609 |
| Cow position: | chr16:12538726-12538595 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-609 |
| Cow position: | chr16:15491906-15492036 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 101, 79 |
| Conread position: | 479-609 |
| Cow position: | chr16:15565948-15566078 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 104, 19 |
| Conread position: | 479-609 |
| Cow position: | chr16:23253307-23253177 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 104, 95 |
| Conread position: | 479-609 |
| Cow position: | chr16:23982510-23982639 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 99, 35 |
| Conread position: | 479-609 |
| Cow position: | chr16:25341166-25341293 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 479-609 |
| Cow position: | chr16:26662946-26663077 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 479-609 |
| Cow position: | chr16:27734606-27734475 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-611 |
| Cow position: | chr16:25157022-25156890 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 479-635 |
| Cow position: | chr16:25084819-25084969 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 103, 79 |
| Conread position: | 479-637 |
| Cow position: | chr16:32935357-32935509 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 50, 46 |
| Conread position: | 480-609 |
| Cow position: | chr16:2483940-2483815 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 102, 65 |
| Conread position: | 480-609 |
| Cow position: | chr16:14666631-14666501 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 480-609 |
| Cow position: | chr16:29046220-29046350 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 482-607 |
| Cow position: | chr16:11052364-11052488 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 95, 44 |
| Conread position: | 491-609 |
| Cow position: | chr16:2728091-2727973 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 72 |
Show alignments to all cow chromosomes.