Cow genome map
| Conread name: | unkn-08B04at3 |
| Conread position: | 451-604 |
| Cow position: | chr18:33953615-33953460 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 114 |
| Conread position: | 451-604 |
| Cow position: | chr18:44621712-44621868 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 451-606 |
| Cow position: | chr18:22602440-22602598 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 451-606 |
| Cow position: | chr18:51689579-51689735 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 115 |
| Conread position: | 451-607 |
| Cow position: | chr18:54044748-54044595 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 451-609 |
| Cow position: | chr18:14415929-14416090 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 451-609 |
| Cow position: | chr18:19352339-19352499 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 451-609 |
| Cow position: | chr18:23797602-23797761 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 451-609 |
| Cow position: | chr18:27986980-27987141 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 451-636 |
| Cow position: | chr18:51310535-51310720 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 134, 107 |
| Conread position: | 451-637 |
| Cow position: | chr18:43146971-43146790 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 131, 158 |
| Conread position: | 470-604 |
| Cow position: | chr18:47741992-47742127 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 470-606 |
| Cow position: | chr18:32293745-32293879 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 112, 35 |
| Conread position: | 470-609 |
| Cow position: | chr18:11275132-11274992 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 470-609 |
| Cow position: | chr18:54024385-54024245 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 112 |
| Conread position: | 470-609 |
| Cow position: | chr18:55088951-55088811 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 470-635 |
| Cow position: | chr18:51341660-51341820 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 109, 139 |
| Conread position: | 470-637 |
| Cow position: | chr18:43201033-43201190 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 112, 9 |
| Conread position: | 473-606 |
| Cow position: | chr18:51480814-51480950 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 473-609 |
| Cow position: | chr18:52650908-52651041 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 109, 62 |
| Conread position: | 474-637 |
| Cow position: | chr18:16533957-16534114 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 112, 71 |
| Conread position: | 474-637 |
| Cow position: | chr18:23944395-23944239 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 103, 52 |
| Conread position: | 475-605 |
| Cow position: | chr18:47719604-47719475 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 475-607 |
| Cow position: | chr18:2887042-2886909 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 475-636 |
| Cow position: | chr18:51257956-51258118 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 107, 146 |
| Conread position: | 475-637 |
| Cow position: | chr18:2019707-2019550 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 110, 134 |
| Conread position: | 475-637 |
| Cow position: | chr18:33335847-33336003 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 107, 51 |
| Conread position: | 475-637 |
| Cow position: | chr18:33358846-33359003 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 107, 134 |
| Conread position: | 475-637 |
| Cow position: | chr18:48221856-48222015 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 104, 136 |
| Conread position: | 476-607 |
| Cow position: | chr18:1521111-1521240 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 49 |
| Conread position: | 476-637 |
| Cow position: | chr18:16660025-16659869 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 106, 133 |
| Conread position: | 479-601 |
| Cow position: | chr18:54171862-54171740 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 107, 84 |
| Conread position: | 479-609 |
| Cow position: | chr18:28973920-28973789 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-609 |
| Cow position: | chr18:36508316-36508447 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-609 |
| Cow position: | chr18:37505046-37505178 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-609 |
| Cow position: | chr18:39748559-39748692 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 479-609 |
| Cow position: | chr18:40478370-40478497 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 104, 71 |
| Conread position: | 479-609 |
| Cow position: | chr18:41840842-41840711 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-611 |
| Cow position: | chr18:6869274-6869143 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 103, 75 |
| Conread position: | 480-606 |
| Cow position: | chr18:53785821-53785947 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 102, 65 |
| Conread position: | 482-637 |
| Cow position: | chr18:29236798-29236946 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.