Cow genome map
| Conread name: | unkn-08B04at3 |
| Conread position: | 446-609 |
| Cow position: | chr9:6051293-6051130 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 137, 40 |
| Conread position: | 451-601 |
| Cow position: | chr9:781047-780893 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 451-604 |
| Cow position: | chr9:30826440-30826596 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 451-604 |
| Cow position: | chr9:34242839-34242681 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 451-604 |
| Cow position: | chr9:45873108-45873263 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 451-604 |
| Cow position: | chr9:50789436-50789592 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 451-606 |
| Cow position: | chr9:9055307-9055149 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 451-606 |
| Cow position: | chr9:16175526-16175684 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 451-609 |
| Cow position: | chr9:30672129-30672287 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 131, 87 |
| Conread position: | 451-610 |
| Cow position: | chr9:1252208-1252050 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 451-611 |
| Cow position: | chr9:31194408-31194245 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 451-637 |
| Cow position: | chr9:25483632-25483815 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 160 |
| Conread position: | 458-604 |
| Cow position: | chr9:1076431-1076284 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 470-603 |
| Cow position: | chr9:131416-131283 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 112, 40 |
| Conread position: | 470-603 |
| Cow position: | chr9:46626019-46625886 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 116, 86 |
| Conread position: | 470-604 |
| Cow position: | chr9:27933874-27934009 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 470-609 |
| Cow position: | chr9:222769-222628 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 470-609 |
| Cow position: | chr9:4672387-4672527 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 470-609 |
| Cow position: | chr9:28677755-28677894 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 470-609 |
| Cow position: | chr9:59174377-59174239 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 470-611 |
| Cow position: | chr9:792734-792592 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 470-611 |
| Cow position: | chr9:59443632-59443771 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 470-635 |
| Cow position: | chr9:3006466-3006306 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 110, 139 |
| Conread position: | 470-635 |
| Cow position: | chr9:17064618-17064458 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 112, 139 |
| Conread position: | 470-637 |
| Cow position: | chr9:831654-831492 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 106, 139 |
| Conread position: | 473-609 |
| Cow position: | chr9:28021330-28021468 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 473-609 |
| Cow position: | chr9:42568653-42568791 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 473-609 |
| Cow position: | chr9:59482890-59482753 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 474-602 |
| Cow position: | chr9:54360385-54360514 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 475-604 |
| Cow position: | chr9:2500511-2500380 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 475-606 |
| Cow position: | chr9:2170840-2170975 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 475-606 |
| Cow position: | chr9:3567068-3566937 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 475-607 |
| Cow position: | chr9:10315153-10315283 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 475-607 |
| Cow position: | chr9:15072301-15072432 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 475-609 |
| Cow position: | chr9:29628962-29628827 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 475-609 |
| Cow position: | chr9:59455814-59455680 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 108, 48 |
| Conread position: | 475-635 |
| Cow position: | chr9:2185746-2185900 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 110, 82 |
| Conread position: | 475-637 |
| Cow position: | chr9:8969141-8968981 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 107, 137 |
| Conread position: | 475-637 |
| Cow position: | chr9:28626256-28626099 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 107, 73 |
| Conread position: | 476-637 |
| Cow position: | chr9:3155818-3155969 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 479-606 |
| Cow position: | chr9:7002341-7002469 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-606 |
| Cow position: | chr9:31807322-31807450 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-606 |
| Cow position: | chr9:37163019-37162891 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 479-607 |
| Cow position: | chr9:37064006-37063879 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 75 |
| Conread position: | 479-609 |
| Cow position: | chr9:3542599-3542726 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 103, 79 |
| Conread position: | 479-609 |
| Cow position: | chr9:3548384-3548252 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 479-609 |
| Cow position: | chr9:7062304-7062173 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-609 |
| Cow position: | chr9:25023513-25023382 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-609 |
| Cow position: | chr9:27034495-27034620 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 104, 57 |
| Conread position: | 479-609 |
| Cow position: | chr9:37971418-37971290 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 128, 103 |
| Conread position: | 479-609 |
| Cow position: | chr9:42309471-42309602 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-609 |
| Cow position: | chr9:59535886-59536014 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 98, 79 |
| Conread position: | 479-609 |
| Cow position: | chr9:60278233-60278102 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-610 |
| Cow position: | chr9:29028440-29028308 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 479-612 |
| Cow position: | chr9:1996124-1995990 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 480-637 |
| Cow position: | chr9:31020598-31020750 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 102, 129 |
| Conread position: | 480-637 |
| Cow position: | chr9:37129747-37129596 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 483-611 |
| Cow position: | chr9:2199899-2200028 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 483-611 |
| Cow position: | chr9:25755431-25755302 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 485-606 |
| Cow position: | chr9:9012899-9013021 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 486-609 |
| Cow position: | chr9:6830762-6830637 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
Show alignments to all cow chromosomes.