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Cow genome map

           
Conread name:
           
unkn-09A08GT3
        

               
Conread position:
               
1-139
               

               
Cow position:
               
chr1:55181635-55181774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr1:55184973-55184834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr1:3570120-3570266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr1:96043812-96043648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
123, 69
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr1:43790046-43789883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr1:9958697-9958530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
35, 149
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr1:90390188-90390356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr1:36896969-36897147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr1:88910713-88910898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
104, 39
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr1:62732757-62732568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr1:70416319-70416118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
123, 14
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr1:75998279-75998491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr1:74081790-74082008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr1:3288956-3289168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
129, 42
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr1:51904150-51904363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr1:57119155-57119374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr1:61225469-61225266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 53
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr1:21787535-21787306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
56, 215
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr1:88321754-88321972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr1:85141544-85141768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
123, 16
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr1:36613900-36614127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 42
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr1:50634068-50634302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
129, 155
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr1:2765593-2765368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr1:13228174-13227933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr1:20582133-20581897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr1:22777351-22777588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
123, 213
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr1:26531393-26531630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr1:30066812-30066574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
126, 19
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr1:31871620-31871382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
107, 39
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr1:35170518-35170291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr1:45479399-45479631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
123, 152
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr1:46206001-46205775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 42
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr1:46839800-46839558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
116, 31
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr1:64218238-64218472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr1:66355522-66355759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
123, 161
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr1:82880842-82880601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
71, 157
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr1:93110420-93110664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-149
               

               
Cow position:
               
chr1:44169845-44169695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
2-165
               

               
Cow position:
               
chr1:64624638-64624800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr1:29338108-29337933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
2-182
               

               
Cow position:
               
chr1:5102303-5102478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 41
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chr1:82076763-82076586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr1:33921088-33921272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 169
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr1:39183632-39183836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
130, 61
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr1:96346498-96346701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
2-206
               

               
Cow position:
               
chr1:10063794-10063990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr1:53039519-53039717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr1:23759975-23759757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr1:46006018-46006232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
2-225
               

               
Cow position:
               
chr1:76170396-76170173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
32, 156
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr1:59132020-59132249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
12, 224
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr1:5278229-5278444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr1:74946929-74947153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr1:35843731-35843963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr1:25793248-25793478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr1:38525799-38525545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr1:69415519-69415756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 107
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr1:76096625-76096392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
15, 97
               

               
Conread position:
               
3-137
               

               
Cow position:
               
chr1:19416690-19416823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
121, 58
               

               
Conread position:
               
3-165
               

               
Cow position:
               
chr1:14980929-14981098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr1:81177669-81177831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr1:79663244-79663418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-176
               

               
Cow position:
               
chr1:49347369-49347200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
124, 83
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr1:46822159-46821973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr1:82371125-82370951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
103, 60
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr1:13733278-13733457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
121, 26
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr1:5347245-5347054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr1:45310085-45310280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr1:97622030-97622228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
102, 148
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr1:71782481-71782675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr1:76206765-76206970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr1:75183561-75183772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 152
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr1:15902685-15902465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
121, 196
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr1:54289001-54289227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
125, 209
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr1:78791118-78791338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr1:46218758-46218531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr1:45638668-45638443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr1:96929220-96928994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr1:39121658-39121883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
121, 51
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr1:44747050-44746821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
121, 102
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr1:64189691-64189454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr1:89548377-89548148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
121, 95
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr1:90422892-90423127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
121, 159
               

               
Conread position:
               
4-113
               

               
Cow position:
               
chr1:57389953-57390062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr1:53920776-53920582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
121, 154
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr1:62142300-62142493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
120, 21
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr1:13195244-13195453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
120, 91
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr1:45925230-45925017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
27, 112
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr1:15314728-15314952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
85, 76
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr1:61737285-61737065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 151
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr1:82378980-82378759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
118, 91
               

               
Conread position:
               
4-228
               

               
Cow position:
               
chr1:97603451-97603667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
120, 13
               

               
Conread position:
               
4-229
               

               
Cow position:
               
chr1:18414281-18414501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
4-229
               

               
Cow position:
               
chr1:54478524-54478290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr1:31390403-31390633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr1:52414775-52415004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
201, 87
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr1:18283670-18283440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
118, 19
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr1:33986333-33986554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr1:51257202-51256971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
120, 10
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr1:63504521-63504290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
118, 10
               

               
Conread position:
               
5-193
               

               
Cow position:
               
chr1:24188407-24188222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr1:70236080-70236269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr1:25184299-25184095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
117, 150
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr1:38205658-38205448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
119, 34
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr1:8919377-8919591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
5-227
               

               
Cow position:
               
chr1:65665240-65665023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
157, 110
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr1:31189929-31190150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
119, 10
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr1:54217204-54216974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
120, 112
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr1:21679336-21679110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
123, 44
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr1:7657131-7657356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
117, 46
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr1:26688284-26688518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
119, 127
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr1:28678711-28678476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr1:89443291-89443525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 8
               

               
Conread position:
               
6-216
               

               
Cow position:
               
chr1:28657496-28657708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr1:56643416-56643627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 150
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr1:541981-541765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr1:15028943-15028717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 109
               

               
Conread position:
               
9-189
               

               
Cow position:
               
chr1:50261745-50261924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
9-189
               

               
Cow position:
               
chr1:95229146-95229328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
96, 100
               

               
Conread position:
               
9-204
               

               
Cow position:
               
chr1:96339918-96339736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 55
               

               
Conread position:
               
9-239
               

               
Cow position:
               
chr1:23100085-23099856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
115, 86
               

               
Conread position:
               
9-239
               

               
Cow position:
               
chr1:92010500-92010263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 229
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr1:39224737-39224954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-150
               

               
Cow position:
               
chr1:101107814-101107680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
11-189
               

               
Cow position:
               
chr1:80384581-80384760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
11-205
               

               
Cow position:
               
chr1:17821610-17821417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
113, 145
               

               
Conread position:
               
11-230
               

               
Cow position:
               
chr1:14098968-14098755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
113, 138
               

               
Conread position:
               
11-239
               

               
Cow position:
               
chr1:59650452-59650223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
116, 34
               

               
Conread position:
               
14-218
               

               
Cow position:
               
chr1:49130952-49131152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 111
               

               
Conread position:
               
14-230
               

               
Cow position:
               
chr1:42555441-42555227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 29
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr1:23041742-23041525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
113, 21
               

               
Conread position:
               
14-239
               

               
Cow position:
               
chr1:79115525-79115299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
111, 143
               

               
Conread position:
               
15-169
               

               
Cow position:
               
chr1:93031587-93031741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
15-238
               

               
Cow position:
               
chr1:85411748-85411535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
19-229
               

               
Cow position:
               
chr1:70533764-70533970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
105, 131
               

               
Conread position:
               
19-238
               

               
Cow position:
               
chr1:80764361-80764580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
105, 196
               

               
Conread position:
               
19-239
               

               
Cow position:
               
chr1:3657192-3657408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
106, 62
               

               
Conread position:
               
19-239
               

               
Cow position:
               
chr1:71136324-71136106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
19-239
               

               
Cow position:
               
chr1:95764919-95765133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
105, 76
               

               
Conread position:
               
20-216
               

               
Cow position:
               
chr1:54125053-54125250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
22-217
               

               
Cow position:
               
chr1:22910524-22910338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
23-239
               

               
Cow position:
               
chr1:21934013-21934219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
23-239
               

               
Cow position:
               
chr1:26427691-26427908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
23-239
               

               
Cow position:
               
chr1:58825710-58825497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
105, 55
               

               
Conread position:
               
26-238
               

               
Cow position:
               
chr1:90413542-90413337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
191, 45
               

               
Conread position:
               
27-238
               

               
Cow position:
               
chr1:2998117-2997904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 144
               

               
Conread position:
               
28-229
               

               
Cow position:
               
chr1:72641478-72641680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
91, 178
               

               
Conread position:
               
33-230
               

               
Cow position:
               
chr1:72807481-72807284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 163
               

               
Conread position:
               
34-199
               

               
Cow position:
               
chr1:44511374-44511540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
36-228
               

               
Cow position:
               
chr1:30442114-30441923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
88, 113
               

               
Conread position:
               
40-237
               

               
Cow position:
               
chr1:72732194-72731996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
40-239
               

               
Cow position:
               
chr1:29975453-29975646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 22
               

               
Conread position:
               
41-227
               

               
Cow position:
               
chr1:32913894-32913709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 8
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr1:15691481-15691290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
43-239
               

               
Cow position:
               
chr1:41735470-41735667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
43-239
               

               
Cow position:
               
chr1:75347775-75347578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
50-239
               

               
Cow position:
               
chr1:80973465-80973649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
77, 49
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr1:8192597-8192775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 33
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr1:48083866-48083683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 52
               

               
Conread position:
               
56-233
               

               
Cow position:
               
chr1:69004528-69004357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 42
               

               
Conread position:
               
56-239
               

               
Cow position:
               
chr1:5228828-5229011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 175
               

               
Conread position:
               
61-237
               

               
Cow position:
               
chr1:101772032-101771862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
61-239
               

               
Cow position:
               
chr1:10719348-10719524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
62-208
               

               
Cow position:
               
chr1:50345677-50345530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
87-239
               

               
Cow position:
               
chr1:57783111-57782961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
108-238
               

               
Cow position:
               
chr1:92642363-92642493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 89
               
Show alignments to all cow chromosomes.