Cow genome map

Conread name: unkn-09A08GT3

Conread position: 1-91
Cow position:
Alignm length: 91
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-222
Cow position:
Alignm length: 223
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 219

Conread position: 1-223
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 123, 69

Conread position: 1-227
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 123, 13

Conread position: 1-228
Cow position:
Alignm length: 230
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 104, 80

Conread position: 1-228
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 126, 17

Conread position: 1-228
Cow position:
Alignm length: 229
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 123, 94

Conread position: 1-229
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 121, 44

Conread position: 1-237
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 123, 59

Conread position: 1-237
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 78

Conread position: 1-237
Cow position:
Alignm length: 239
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 135

Conread position: 1-239
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 22

Conread position: 1-239
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 128, 30

Conread position: 1-239
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 12, 81

Conread position: 1-239
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 97, 124

Conread position: 1-239
Cow position:
Alignm length: 242
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 82, 20

Conread position: 1-239
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 123, 13

Conread position: 1-239
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 14

Conread position: 2-120
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 2-163
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 122, 12

Conread position: 2-180
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 2-201
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 122, 13

Conread position: 2-201
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 122, 38

Conread position: 2-212
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 202, 110

Conread position: 2-222
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 96, 70

Conread position: 2-226
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 122, 91

Conread position: 2-226
Cow position:
Alignm length: 231
Alignm identity: 173
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 58, 149

Conread position: 2-234
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 123, 0

Conread position: 2-237
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 10, 61

Conread position: 2-238
Cow position:
Alignm length: 239
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 2-239
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 38

Conread position: 2-239
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 119, 96

Conread position: 2-239
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 122, 206

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 119, 35

Conread position: 3-170
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 0

Conread position: 3-199
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 13, 80

Conread position: 3-200
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 10, 36

Conread position: 3-200
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 121, 36

Conread position: 3-211
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 3-218
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 121, 87

Conread position: 3-220
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 121, 151

Conread position: 3-221
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 94, 52

Conread position: 3-223
Cow position:
Alignm length: 225
Alignm identity: 154
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 121, 67

Conread position: 3-229
Cow position:
Alignm length: 227
Alignm identity: 153
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 116, 0

Conread position: 3-237
Cow position:
Alignm length: 237
Alignm identity: 172
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 69, 37

Conread position: 3-238
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 3-239
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 211, 37

Conread position: 3-239
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 43

Conread position: 3-239
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 121, 40

Conread position: 3-239
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 121, 87

Conread position: 3-239
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 39

Conread position: 3-239
Cow position:
Alignm length: 240
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 184

Conread position: 4-172
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 91

Conread position: 4-183
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 120, 154

Conread position: 4-205
Cow position:
Alignm length: 204
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 4-225
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 101, 28

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 120, 41

Conread position: 4-238
Cow position:
Alignm length: 240
Alignm identity: 160
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 233

Conread position: 4-239
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 68, 28

Conread position: 5-165
Cow position:
Alignm length: 164
Alignm identity: 133
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 100, 104

Conread position: 5-201
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 126, 148

Conread position: 5-220
Cow position:
Alignm length: 217
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 124, 150

Conread position: 5-239
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 38

Conread position: 6-163
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 6-173
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 6-237
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 122, 60

Conread position: 6-239
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 52

Conread position: 6-239
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 122, 75

Conread position: 6-239
Cow position:
Alignm length: 235
Alignm identity: 176
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 123, 34

Conread position: 6-239
Cow position:
Alignm length: 235
Alignm identity: 176
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 118, 208

Conread position: 7-239
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 117, 65

Conread position: 9-147
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 111, 0

Conread position: 9-183
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 37

Conread position: 9-238
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 118, 148

Conread position: 9-239
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 112, 0

Conread position: 11-221
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 118, 62

Conread position: 11-226
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 14-237
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 110, 29

Conread position: 14-239
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 110, 26

Conread position: 15-182
Cow position:
Alignm length: 169
Alignm identity: 137
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 109, 125

Conread position: 15-239
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 110, 28

Conread position: 18-209
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 107, 25

Conread position: 19-227
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 105, 198

Conread position: 19-228
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 105, 24

Conread position: 19-233
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 101, 21

Conread position: 19-239
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 33

Conread position: 19-239
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 28

Conread position: 22-239
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 111, 40

Conread position: 23-208
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 104, 0

Conread position: 23-221
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 99, 20

Conread position: 23-238
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 101, 7

Conread position: 23-239
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 102, 40

Conread position: 23-239
Cow position:
Alignm length: 218
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 27

Conread position: 24-237
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 91

Conread position: 26-203
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 93, 0

Conread position: 32-216
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 11

Conread position: 34-205
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 126

Conread position: 36-237
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 88, 72

Conread position: 37-233
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 44

Conread position: 46-239
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 35

Conread position: 51-186
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 55-217
Cow position:
Alignm length: 165
Alignm identity: 133
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 143

Conread position: 55-218
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 79, 154

Conread position: 55-234
Cow position:
Alignm length: 180
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 147, 0

Conread position: 55-239
Cow position:
Alignm length: 186
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 156

Conread position: 61-228
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 51

Conread position: 63-199
Cow position:
Alignm length: 138
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 82-218
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 107

Show alignments to all cow chromosomes.