Cow genome map
| Conread name: | unkn-09A08GT3 |
| Conread position: | 1-140 |
| Cow position: | chr11:41323097-41323234 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-160 |
| Cow position: | chr11:11460641-11460484 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 124, 90 |
| Conread position: | 1-162 |
| Cow position: | chr11:56796360-56796523 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1-165 |
| Cow position: | chr11:40269429-40269590 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 126, 35 |
| Conread position: | 1-180 |
| Cow position: | chr11:6729837-6729656 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1-184 |
| Cow position: | chr11:2393922-2394099 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 37 |
| Conread position: | 1-186 |
| Cow position: | chr11:24216306-24216125 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 119, 47 |
| Conread position: | 1-186 |
| Cow position: | chr11:58112758-58112944 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 97, 107 |
| Conread position: | 1-198 |
| Cow position: | chr11:62573839-62574038 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 112, 78 |
| Conread position: | 1-205 |
| Cow position: | chr11:14045910-14046112 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 119, 59 |
| Conread position: | 1-205 |
| Cow position: | chr11:65958530-65958735 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 11, 128 |
| Conread position: | 1-206 |
| Cow position: | chr11:72869654-72869855 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-208 |
| Cow position: | chr11:19268923-19269121 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-212 |
| Cow position: | chr11:47125713-47125506 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 104, 124 |
| Conread position: | 1-215 |
| Cow position: | chr11:70400010-70399805 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 125 |
| Conread position: | 1-216 |
| Cow position: | chr11:29802425-29802633 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 94, 37 |
| Conread position: | 1-219 |
| Cow position: | chr11:63156755-63156970 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 127, 61 |
| Conread position: | 1-221 |
| Cow position: | chr11:54244842-54244622 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 195, 214 |
| Conread position: | 1-228 |
| Cow position: | chr11:38845099-38845319 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 127, 14 |
| Conread position: | 1-228 |
| Cow position: | chr11:75874583-75874814 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 78, 223 |
| Conread position: | 1-237 |
| Cow position: | chr11:26468315-26468081 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 1-238 |
| Cow position: | chr11:11752347-11752584 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 119, 208 |
| Conread position: | 1-239 |
| Cow position: | chr11:1596293-1596523 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 110, 68 |
| Conread position: | 1-239 |
| Cow position: | chr11:7001761-7002000 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 126, 13 |
| Conread position: | 1-239 |
| Cow position: | chr11:16342059-16342298 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 66 |
| Conread position: | 1-239 |
| Cow position: | chr11:31507017-31506778 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 123, 73 |
| Conread position: | 1-239 |
| Cow position: | chr11:42519901-42519672 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 124, 51 |
| Conread position: | 1-239 |
| Cow position: | chr11:52832557-52832784 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 126, 39 |
| Conread position: | 1-239 |
| Cow position: | chr11:67871434-67871673 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 123, 183 |
| Conread position: | 1-239 |
| Cow position: | chr11:69402082-69402318 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 123, 91 |
| Conread position: | 2-138 |
| Cow position: | chr11:76851669-76851806 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 2-154 |
| Cow position: | chr11:54058159-54058006 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 2-165 |
| Cow position: | chr11:34136670-34136506 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-167 |
| Cow position: | chr11:40554004-40553842 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 122, 12 |
| Conread position: | 2-186 |
| Cow position: | chr11:34642068-34642246 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 122, 25 |
| Conread position: | 2-186 |
| Cow position: | chr11:60985114-60985294 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 120, 38 |
| Conread position: | 2-195 |
| Cow position: | chr11:30211073-30210877 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 2-216 |
| Cow position: | chr11:76391858-76392064 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 122, 38 |
| Conread position: | 2-225 |
| Cow position: | chr11:35882079-35881859 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 122, 181 |
| Conread position: | 2-227 |
| Cow position: | chr11:12111287-12111511 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 9, 110 |
| Conread position: | 2-229 |
| Cow position: | chr11:43646242-43646472 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 2-230 |
| Cow position: | chr11:20491731-20491510 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 123, 18 |
| Conread position: | 2-234 |
| Cow position: | chr11:19502136-19501909 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 0 |
| Conread position: | 2-238 |
| Cow position: | chr11:53445938-53445710 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 123, 41 |
| Conread position: | 2-239 |
| Cow position: | chr11:19259344-19259582 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 117, 213 |
| Conread position: | 2-239 |
| Cow position: | chr11:21136982-21136745 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 125, 168 |
| Conread position: | 2-239 |
| Cow position: | chr11:37372479-37372241 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 123, 198 |
| Conread position: | 2-239 |
| Cow position: | chr11:43525953-43526195 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 70, 135 |
| Conread position: | 2-239 |
| Cow position: | chr11:62019417-62019660 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 98, 89 |
| Conread position: | 2-239 |
| Cow position: | chr11:67236563-67236333 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 122, 36 |
| Conread position: | 3-155 |
| Cow position: | chr11:22009219-22009373 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 119 |
| Conread position: | 3-172 |
| Cow position: | chr11:29978166-29978340 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 3-178 |
| Cow position: | chr11:77008204-77008033 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 3-180 |
| Cow position: | chr11:56821075-56821254 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 3-186 |
| Cow position: | chr11:13306656-13306836 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 121, 152 |
| Conread position: | 3-193 |
| Cow position: | chr11:54133920-54134109 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 78 |
| Conread position: | 3-198 |
| Cow position: | chr11:4059896-4060088 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 122, 12 |
| Conread position: | 3-201 |
| Cow position: | chr11:19606479-19606286 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 121, 92 |
| Conread position: | 3-213 |
| Cow position: | chr11:62215025-62215237 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 3-219 |
| Cow position: | chr11:63508578-63508365 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 125, 95 |
| Conread position: | 3-220 |
| Cow position: | chr11:76404471-76404252 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 81 |
| Conread position: | 3-230 |
| Cow position: | chr11:44815671-44815445 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 124, 92 |
| Conread position: | 3-237 |
| Cow position: | chr11:8828465-8828695 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 121, 152 |
| Conread position: | 3-237 |
| Cow position: | chr11:41272305-41272070 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 121, 178 |
| Conread position: | 3-238 |
| Cow position: | chr11:48983282-48983057 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 122 |
| Conread position: | 3-239 |
| Cow position: | chr11:45890126-45889897 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 124, 152 |
| Conread position: | 3-239 |
| Cow position: | chr11:81518013-81518242 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 122, 36 |
| Conread position: | 4-159 |
| Cow position: | chr11:49218181-49218338 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 4-237 |
| Cow position: | chr11:31894438-31894209 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 120, 151 |
| Conread position: | 4-238 |
| Cow position: | chr11:9874479-9874252 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 123, 91 |
| Conread position: | 4-238 |
| Cow position: | chr11:32072309-32072083 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 190, 102 |
| Conread position: | 4-239 |
| Cow position: | chr11:16001092-16000860 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 109, 150 |
| Conread position: | 4-239 |
| Cow position: | chr11:28395642-28395405 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 4-239 |
| Cow position: | chr11:50953398-50953634 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 10 |
| Conread position: | 4-239 |
| Cow position: | chr11:51745509-51745288 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 118, 36 |
| Conread position: | 5-96 |
| Cow position: | chr11:84859078-84858988 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 79 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 5-163 |
| Cow position: | chr11:372979-373139 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 5-211 |
| Cow position: | chr11:40275436-40275642 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 120, 197 |
| Conread position: | 5-211 |
| Cow position: | chr11:40278928-40279134 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 120, 197 |
| Conread position: | 5-215 |
| Cow position: | chr11:65988386-65988180 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 119, 33 |
| Conread position: | 5-218 |
| Cow position: | chr11:24626003-24625797 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 123, 38 |
| Conread position: | 5-225 |
| Cow position: | chr11:17151836-17151620 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 119, 148 |
| Conread position: | 5-227 |
| Cow position: | chr11:21852130-21852360 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 8, 224 |
| Conread position: | 5-228 |
| Cow position: | chr11:18699055-18698821 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 5-238 |
| Cow position: | chr11:84795587-84795817 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 119, 27 |
| Conread position: | 5-239 |
| Cow position: | chr11:9056122-9055891 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 120, 50 |
| Conread position: | 5-239 |
| Cow position: | chr11:9368991-9368759 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 100, 139 |
| Conread position: | 6-165 |
| Cow position: | chr11:5188290-5188133 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 118, 55 |
| Conread position: | 6-180 |
| Cow position: | chr11:44609724-44609554 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 6-221 |
| Cow position: | chr11:47193678-47193462 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 118, 142 |
| Conread position: | 6-239 |
| Cow position: | chr11:32438788-32439021 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 84 |
| Conread position: | 9-233 |
| Cow position: | chr11:19238006-19238218 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 9-239 |
| Cow position: | chr11:47565777-47566007 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 113, 11 |
| Conread position: | 11-227 |
| Cow position: | chr11:27722552-27722333 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 11-229 |
| Cow position: | chr11:6041595-6041807 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 29 |
| Conread position: | 11-238 |
| Cow position: | chr11:50937579-50937815 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 59, 183 |
| Conread position: | 11-238 |
| Cow position: | chr11:52402622-52402396 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 114, 33 |
| Conread position: | 11-239 |
| Cow position: | chr11:53452190-53452415 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 113, 144 |
| Conread position: | 14-216 |
| Cow position: | chr11:14941454-14941651 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 110, 141 |
| Conread position: | 14-227 |
| Cow position: | chr11:27681657-27681443 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 14-228 |
| Cow position: | chr11:5648895-5648687 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 113, 86 |
| Conread position: | 14-237 |
| Cow position: | chr11:34945915-34946138 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 111, 201 |
| Conread position: | 15-239 |
| Cow position: | chr11:14308790-14308569 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 113, 44 |
| Conread position: | 18-222 |
| Cow position: | chr11:19586613-19586407 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 194 |
| Conread position: | 19-212 |
| Cow position: | chr11:36701896-36701710 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 106, 19 |
| Conread position: | 19-218 |
| Cow position: | chr11:1668817-1668621 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 105, 74 |
| Conread position: | 19-237 |
| Cow position: | chr11:11785484-11785265 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 79, 190 |
| Conread position: | 19-239 |
| Cow position: | chr11:7684108-7683897 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 202, 133 |
| Conread position: | 19-239 |
| Cow position: | chr11:84890557-84890788 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 218 |
| Conread position: | 23-232 |
| Cow position: | chr11:696201-696410 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 160 |
| Conread position: | 23-238 |
| Cow position: | chr11:59365927-59366145 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 23-239 |
| Cow position: | chr11:50951702-50951487 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 72 |
| Conread position: | 25-239 |
| Cow position: | chr11:25112372-25112587 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 90 |
| Conread position: | 26-163 |
| Cow position: | chr11:76007523-76007385 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 98, 117 |
| Conread position: | 26-186 |
| Cow position: | chr11:35668301-35668471 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 28-239 |
| Cow position: | chr11:24243932-24243726 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 29-220 |
| Cow position: | chr11:73499061-73499240 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 26 |
| Conread position: | 34-217 |
| Cow position: | chr11:17452367-17452189 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 90, 9 |
| Conread position: | 35-219 |
| Cow position: | chr11:31422866-31422681 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 40-223 |
| Cow position: | chr11:61427723-61427540 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 69 |
| Conread position: | 40-237 |
| Cow position: | chr11:39809119-39808925 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 5, 30 |
| Conread position: | 49-239 |
| Cow position: | chr11:60137811-60137626 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 51-239 |
| Cow position: | chr11:56892935-56892751 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 21, 34 |
| Conread position: | 55-227 |
| Cow position: | chr11:72082819-72082651 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 69, 100 |
| Conread position: | 56-189 |
| Cow position: | chr11:8232336-8232469 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 72, 28 |
| Conread position: | 75-230 |
| Cow position: | chr11:25861512-25861664 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 68 |
| Conread position: | 108-239 |
| Cow position: | chr11:28691692-28691826 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.