Cow genome map
| Conread name: | unkn-09A08GT3 |
| Conread position: | 1-144 |
| Cow position: | chr19:30652916-30653061 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1-162 |
| Cow position: | chr19:54817358-54817521 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 104, 108 |
| Conread position: | 1-167 |
| Cow position: | chr19:11759053-11759221 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 1-179 |
| Cow position: | chr19:39222935-39223106 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 123, 72 |
| Conread position: | 1-195 |
| Cow position: | chr19:22932373-22932568 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1-198 |
| Cow position: | chr19:2280471-2280662 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 121, 42 |
| Conread position: | 1-204 |
| Cow position: | chr19:28842184-28842388 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1-209 |
| Cow position: | chr19:14254557-14254761 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 124, 73 |
| Conread position: | 1-211 |
| Cow position: | chr19:36380398-36380190 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 120, 73 |
| Conread position: | 1-217 |
| Cow position: | chr19:9092636-9092850 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 123, 101 |
| Conread position: | 1-218 |
| Cow position: | chr19:10970914-10971140 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1-228 |
| Cow position: | chr19:12040794-12040572 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 123, 170 |
| Conread position: | 1-233 |
| Cow position: | chr19:15937006-15936782 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-238 |
| Cow position: | chr19:9387810-9387576 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 127, 138 |
| Conread position: | 1-238 |
| Cow position: | chr19:19246945-19246712 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 155, 31 |
| Conread position: | 1-238 |
| Cow position: | chr19:31614284-31614050 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 70, 94 |
| Conread position: | 1-239 |
| Cow position: | chr19:905142-904917 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 1-239 |
| Cow position: | chr19:33686259-33686027 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 123, 105 |
| Conread position: | 1-239 |
| Cow position: | chr19:43727308-43727077 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 126, 69 |
| Conread position: | 2-175 |
| Cow position: | chr19:1153381-1153206 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 2-218 |
| Cow position: | chr19:5648497-5648707 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 121, 38 |
| Conread position: | 2-218 |
| Cow position: | chr19:11636771-11636980 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 120, 57 |
| Conread position: | 2-225 |
| Cow position: | chr19:952863-952646 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 123, 82 |
| Conread position: | 2-225 |
| Cow position: | chr19:35540476-35540243 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 2-237 |
| Cow position: | chr19:39250431-39250206 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 122, 34 |
| Conread position: | 2-239 |
| Cow position: | chr19:11876527-11876764 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 2-239 |
| Cow position: | chr19:24721850-24721616 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 122, 79 |
| Conread position: | 2-239 |
| Cow position: | chr19:31984475-31984712 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 122, 28 |
| Conread position: | 2-239 |
| Cow position: | chr19:40026759-40026993 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 109, 68 |
| Conread position: | 3-186 |
| Cow position: | chr19:46498102-46497927 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 122, 36 |
| Conread position: | 3-187 |
| Cow position: | chr19:47783590-47783777 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 117, 11 |
| Conread position: | 3-201 |
| Cow position: | chr19:26003440-26003641 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 3-221 |
| Cow position: | chr19:30935596-30935817 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 31, 76 |
| Conread position: | 3-229 |
| Cow position: | chr19:41645542-41645308 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 3-238 |
| Cow position: | chr19:48479147-48478919 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 121, 11 |
| Conread position: | 3-239 |
| Cow position: | chr19:27346490-27346711 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 4-165 |
| Cow position: | chr19:56008558-56008713 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 120, 35 |
| Conread position: | 4-221 |
| Cow position: | chr19:32214970-32214757 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 4-228 |
| Cow position: | chr19:31126970-31126745 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 4-239 |
| Cow position: | chr19:19662208-19661985 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 5-199 |
| Cow position: | chr19:31380835-31381025 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 116, 127 |
| Conread position: | 5-205 |
| Cow position: | chr19:21284909-21285107 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 100, 151 |
| Conread position: | 5-239 |
| Cow position: | chr19:36976740-36976974 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 123, 182 |
| Conread position: | 8-208 |
| Cow position: | chr19:4824813-4825014 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 112, 175 |
| Conread position: | 8-239 |
| Cow position: | chr19:1712972-1713204 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 9-228 |
| Cow position: | chr19:20291925-20292143 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 119, 65 |
| Conread position: | 10-239 |
| Cow position: | chr19:25271252-25271476 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 114, 145 |
| Conread position: | 11-162 |
| Cow position: | chr19:50786375-50786523 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 113, 87 |
| Conread position: | 11-172 |
| Cow position: | chr19:46306180-46306334 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 113, 27 |
| Conread position: | 11-239 |
| Cow position: | chr19:38907196-38907418 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 14-239 |
| Cow position: | chr19:2770855-2771073 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 110, 12 |
| Conread position: | 14-239 |
| Cow position: | chr19:38871231-38871005 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 198 |
| Conread position: | 15-239 |
| Cow position: | chr19:35345090-35344864 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 109, 201 |
| Conread position: | 18-179 |
| Cow position: | chr19:38025851-38025689 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 19-239 |
| Cow position: | chr19:7030075-7029856 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 105, 43 |
| Conread position: | 19-239 |
| Cow position: | chr19:36461371-36461592 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 68, 8 |
| Conread position: | 19-239 |
| Cow position: | chr19:55236643-55236428 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 108, 134 |
| Conread position: | 21-179 |
| Cow position: | chr19:5986391-5986231 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 23-173 |
| Cow position: | chr19:42896618-42896462 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 30-237 |
| Cow position: | chr19:7838902-7839102 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 34-217 |
| Cow position: | chr19:24689425-24689244 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 80 |
| Conread position: | 40-228 |
| Cow position: | chr19:6735089-6735279 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 85, 188 |
| Conread position: | 41-234 |
| Cow position: | chr19:3080603-3080404 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 22, 181 |
| Conread position: | 45-239 |
| Cow position: | chr19:3084078-3084269 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 83, 56 |
| Conread position: | 46-221 |
| Cow position: | chr19:35064060-35064239 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 49-218 |
| Cow position: | chr19:36318433-36318267 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 75, 108 |
| Conread position: | 55-239 |
| Cow position: | chr19:2821704-2821521 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 53 |
| Conread position: | 57-186 |
| Cow position: | chr19:47771749-47771621 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 64-233 |
| Cow position: | chr19:9100260-9100089 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 72-226 |
| Cow position: | chr19:10207714-10207561 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 73-221 |
| Cow position: | chr19:16110085-16110232 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 12 |
Show alignments to all cow chromosomes.