Cow genome map

Conread name: unkn-09A08GT3

Conread position: 1-155
Cow position: chr20:37136316-37136160 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 1-158
Cow position: chr20:3105244-3105087 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 14

Conread position: 1-183
Cow position: chr20:21518873-21518696 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 1-199
Cow position: chr20:21236876-21236687 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 124, 17

Conread position: 1-208
Cow position: chr20:19266376-19266179 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 85

Conread position: 1-210
Cow position: chr20:4157645-4157441 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 39

Conread position: 1-218
Cow position: chr20:41109868-41110084 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 1-221
Cow position: chr20:25823506-25823287 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 155, 0

Conread position: 1-223
Cow position: chr20:20359555-20359776 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 120, 14

Conread position: 1-238
Cow position: chr20:15073602-15073841 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 32

Conread position: 1-239
Cow position: chr20:1205708-1205939 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 1-239
Cow position: chr20:14540571-14540335 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 75, 18

Conread position: 2-190
Cow position: chr20:32972774-32972590 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 123, 60

Conread position: 2-201
Cow position: chr20:17363430-17363627 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 0

Conread position: 2-215
Cow position: chr20:7386780-7386574 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 91

Conread position: 2-226
Cow position: chr20:23163678-23163898 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 78, 12

Conread position: 2-238
Cow position: chr20:33178301-33178526 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 122, 20

Conread position: 2-239
Cow position: chr20:14679845-14679614 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 96, 79

Conread position: 2-239
Cow position: chr20:23235258-23235029 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 122, 12

Conread position: 2-239
Cow position: chr20:37029050-37028810 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 39, 56

Conread position: 3-131
Cow position: chr20:8556619-8556748 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 3-158
Cow position: chr20:39669170-39669016 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 121, 46

Conread position: 3-199
Cow position: chr20:7101012-7100812 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 102, 11

Conread position: 3-223
Cow position: chr20:311549-311333 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 69, 113

Conread position: 3-234
Cow position: chr20:10759247-10759477 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 105, 20

Conread position: 3-238
Cow position: chr20:30855532-30855759 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 60, 79

Conread position: 3-239
Cow position: chr20:25686121-25686357 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 119, 11

Conread position: 3-239
Cow position: chr20:35842902-35843134 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 121, 11

Conread position: 4-208
Cow position: chr20:220835-220636 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 100, 94

Conread position: 4-222
Cow position: chr20:4933844-4934061 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 117, 70

Conread position: 4-224
Cow position: chr20:4334293-4334523 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 216

Conread position: 4-239
Cow position: chr20:8262141-8261902 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 40

Conread position: 4-239
Cow position: chr20:9706693-9706926 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 120, 10

Conread position: 4-239
Cow position: chr20:13465732-13465503 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 118, 70

Conread position: 4-239
Cow position: chr20:24643923-24644153 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 120, 147

Conread position: 5-135
Cow position: chr20:2801643-2801772 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 119, 9

Conread position: 5-135
Cow position: chr20:29741185-29741314 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 18

Conread position: 5-171
Cow position: chr20:6104927-6105095 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 5-222
Cow position: chr20:13608845-13609057 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 124, 38

Conread position: 5-239
Cow position: chr20:10837990-10838221 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 114, 59

Conread position: 5-239
Cow position: chr20:24234369-24234149 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 75, 20

Conread position: 6-199
Cow position: chr20:14471342-14471541 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 6-238
Cow position: chr20:5763070-5763302 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 119, 46

Conread position: 6-239
Cow position: chr20:17670403-17670175 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 18, 28

Conread position: 8-231
Cow position: chr20:14513250-14513024 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 32

Conread position: 9-127
Cow position: chr20:922206-922087 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 11-208
Cow position: chr20:35924568-35924759 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 113, 32

Conread position: 11-224
Cow position: chr20:38858216-38858414 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 114, 38

Conread position: 12-239
Cow position: chr20:17397046-17397265 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 112, 59

Conread position: 13-232
Cow position: chr20:18530652-18530433 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 108, 42

Conread position: 14-172
Cow position: chr20:13617446-13617283 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 14-216
Cow position: chr20:2456242-2456045 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 111, 29

Conread position: 14-220
Cow position: chr20:16979965-16979760 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 113, 197

Conread position: 14-239
Cow position: chr20:6903529-6903308 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 110, 44

Conread position: 18-239
Cow position: chr20:19865460-19865247 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 106, 137

Conread position: 19-204
Cow position: chr20:25146989-25146808 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 19

Conread position: 19-236
Cow position: chr20:4204497-4204288 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 108, 136

Conread position: 19-237
Cow position: chr20:13494718-13494508 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 105, 40

Conread position: 20-147
Cow position: chr20:21698964-21698835 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 20-226
Cow position: chr20:15241553-15241759 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 136

Conread position: 34-230
Cow position: chr20:24850003-24849807 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 40

Conread position: 36-237
Cow position: chr20:39220522-39220723 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 85, 112

Conread position: 40-237
Cow position: chr20:25274102-25274294 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 81, 99

Conread position: 57-234
Cow position: chr20:32861827-32862000 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 93-239
Cow position: chr20:20471921-20471775 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 131, 120

Conread position: 102-234
Cow position: chr20:5576904-5576771 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.