Cow genome map

Conread name: unkn-09A08GT3

Conread position: 1-120
Cow position: chr22:11745393-11745510 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 13

Conread position: 1-144
Cow position: chr22:33763301-33763443 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 123, 94

Conread position: 1-160
Cow position: chr22:27469089-27468926 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 126, 0

Conread position: 1-167
Cow position: chr22:43873241-43873073 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 104, 73

Conread position: 1-172
Cow position: chr22:37554333-37554502 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 123, 94

Conread position: 1-186
Cow position: chr22:32690257-32690437 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 123, 72

Conread position: 1-189
Cow position: chr22:11877860-11878050 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 163, 78

Conread position: 1-194
Cow position: chr22:19223931-19223743 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 103, 14

Conread position: 1-197
Cow position: chr22:45291504-45291311 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 123, 168

Conread position: 1-201
Cow position: chr22:25477230-25477030 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 123, 169

Conread position: 1-216
Cow position: chr22:5384836-5384622 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 71, 61

Conread position: 1-217
Cow position: chr22:39983013-39983230 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 1-221
Cow position: chr22:31192394-31192610 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 153, 0

Conread position: 1-226
Cow position: chr22:13188062-13187839 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 108, 39

Conread position: 1-228
Cow position: chr22:16234338-16234109 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 123, 0

Conread position: 1-228
Cow position: chr22:26057569-26057336 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 153

Conread position: 1-237
Cow position: chr22:19040185-19040417 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 42

Conread position: 1-237
Cow position: chr22:41684100-41684338 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 158
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 71, 210

Conread position: 1-238
Cow position: chr22:534691-534448 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 217

Conread position: 1-238
Cow position: chr22:8467574-8467336 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 110, 14

Conread position: 1-238
Cow position: chr22:11778429-11778662 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 55, 13

Conread position: 1-238
Cow position: chr22:42612643-42612405 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 123, 211

Conread position: 1-239
Cow position: chr22:139130-139355 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 124, 14

Conread position: 1-239
Cow position: chr22:9466792-9466558 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 79, 42

Conread position: 1-239
Cow position: chr22:17780547-17780779 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 126, 154

Conread position: 1-239
Cow position: chr22:19047630-19047871 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 160
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 149

Conread position: 1-239
Cow position: chr22:28685509-28685276 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 121, 73

Conread position: 2-111
Cow position: chr22:20840051-20839942 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-158
Cow position: chr22:32053555-32053399 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 123, 12

Conread position: 2-228
Cow position: chr22:28672335-28672102 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 70, 21

Conread position: 2-229
Cow position: chr22:41245432-41245201 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 122, 30

Conread position: 2-238
Cow position: chr22:29441083-29441313 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 125, 12

Conread position: 2-239
Cow position: chr22:34675702-34675468 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 103, 107

Conread position: 2-239
Cow position: chr22:43262632-43262403 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 39

Conread position: 3-127
Cow position: chr22:17835318-17835194 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr22:28180248-28180109 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 3-175
Cow position: chr22:23009762-23009932 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 141

Conread position: 3-213
Cow position: chr22:29004246-29004448 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 72

Conread position: 3-234
Cow position: chr22:9594377-9594141 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 115, 27

Conread position: 3-239
Cow position: chr22:27224309-27224073 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 38

Conread position: 3-239
Cow position: chr22:45355558-45355326 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 78

Conread position: 4-218
Cow position: chr22:4753576-4753790 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 118, 88

Conread position: 4-222
Cow position: chr22:22999772-22999555 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 120, 91

Conread position: 4-237
Cow position: chr22:5622543-5622768 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 124, 58

Conread position: 4-237
Cow position: chr22:41389286-41389056 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 125, 11

Conread position: 5-162
Cow position: chr22:19069264-19069110 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 5-183
Cow position: chr22:17184506-17184686 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 100, 117

Conread position: 5-205
Cow position: chr22:7287691-7287488 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 5-205
Cow position: chr22:15424314-15424114 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 75, 35

Conread position: 5-217
Cow position: chr22:15358426-15358212 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 0

Conread position: 5-221
Cow position: chr22:29868434-29868643 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 120, 35

Conread position: 5-239
Cow position: chr22:18486750-18486979 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 119, 77

Conread position: 5-239
Cow position: chr22:33386331-33386560 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 119, 33

Conread position: 5-239
Cow position: chr22:41927181-41927407 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 114, 35

Conread position: 6-166
Cow position: chr22:17074548-17074387 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 6-166
Cow position: chr22:25168112-25168272 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 66

Conread position: 6-220
Cow position: chr22:43352011-43352227 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 74, 23

Conread position: 6-227
Cow position: chr22:7301663-7301879 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 37

Conread position: 6-228
Cow position: chr22:30429798-30429573 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 173

Conread position: 6-237
Cow position: chr22:44923879-44924111 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 98, 78

Conread position: 6-239
Cow position: chr22:5927786-5928014 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 122, 73

Conread position: 7-164
Cow position: chr22:29256780-29256621 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 9-166
Cow position: chr22:29090226-29090387 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 74

Conread position: 9-218
Cow position: chr22:4026993-4026788 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 110, 64

Conread position: 10-239
Cow position: chr22:25715179-25714950 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 112, 62

Conread position: 13-236
Cow position: chr22:2913448-2913228 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 111, 67

Conread position: 14-138
Cow position: chr22:30521066-30520941 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 14-171
Cow position: chr22:33067127-33066973 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 107, 141

Conread position: 14-239
Cow position: chr22:44835825-44835594 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 110, 29

Conread position: 15-239
Cow position: chr22:22210074-22210298 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 109, 34

Conread position: 17-239
Cow position: chr22:26760875-26760659 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 107, 23

Conread position: 19-202
Cow position: chr22:1081954-1081769 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 19-233
Cow position: chr22:23580680-23580889 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 105, 124

Conread position: 19-239
Cow position: chr22:26941953-26941738 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 105, 24

Conread position: 20-230
Cow position: chr22:42945889-42946096 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 104, 33

Conread position: 23-138
Cow position: chr22:8430232-8430117 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 68

Conread position: 23-239
Cow position: chr22:6574906-6574687 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 82, 56

Conread position: 24-221
Cow position: chr22:4651340-4651139 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 28-212
Cow position: chr22:4036736-4036553 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 116

Conread position: 30-237
Cow position: chr22:3296182-3296384 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 92, 63

Conread position: 31-208
Cow position: chr22:15398424-15398602 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 34-178
Cow position: chr22:19208117-19207973 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 91, 47

Conread position: 34-183
Cow position: chr22:23270196-23270346 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 35-219
Cow position: chr22:19262979-19263168 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 40-239
Cow position: chr22:22997621-22997425 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 85, 164

Conread position: 41-239
Cow position: chr22:5337455-5337653 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 46

Conread position: 45-239
Cow position: chr22:14119116-14118926 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 79, 112

Conread position: 48-237
Cow position: chr22:13274617-13274431 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 107

Conread position: 51-239
Cow position: chr22:10649647-10649832 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 104

Conread position: 55-230
Cow position: chr22:7102962-7102787 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 118

Conread position: 59-239
Cow position: chr22:39293618-39293801 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 20, 32

Conread position: 61-239
Cow position: chr22:12535659-12535833 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 33

Conread position: 74-215
Cow position: chr22:23016848-23016989 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 25

Show alignments to all cow chromosomes.