Cow genome map
| Conread name: | unkn-09A08GT3 |
| Conread position: | 1-109 |
| Cow position: | chr3:39894409-39894519 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 1-154 |
| Cow position: | chr3:33797841-33797688 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 127, 61 |
| Conread position: | 1-160 |
| Cow position: | chr3:43591057-43590894 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 1-164 |
| Cow position: | chr3:68085952-68086111 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-166 |
| Cow position: | chr3:26740878-26741035 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 123, 38 |
| Conread position: | 1-176 |
| Cow position: | chr3:31247823-31247654 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 123, 34 |
| Conread position: | 1-202 |
| Cow position: | chr3:37186989-37186787 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-208 |
| Cow position: | chr3:24300528-24300316 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 33, 201 |
| Conread position: | 1-208 |
| Cow position: | chr3:40100548-40100764 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-208 |
| Cow position: | chr3:70354077-70354276 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 123, 17 |
| Conread position: | 1-216 |
| Cow position: | chr3:25477973-25477752 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 71, 159 |
| Conread position: | 1-218 |
| Cow position: | chr3:17633883-17634098 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 125, 59 |
| Conread position: | 1-218 |
| Cow position: | chr3:60389933-60389708 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-226 |
| Cow position: | chr3:64536408-64536623 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 127, 16 |
| Conread position: | 1-227 |
| Cow position: | chr3:55373404-55373630 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 153 |
| Conread position: | 1-231 |
| Cow position: | chr3:68342098-68342319 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 203, 80 |
| Conread position: | 1-233 |
| Cow position: | chr3:15654988-15655216 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 123, 39 |
| Conread position: | 1-233 |
| Cow position: | chr3:74205646-74205877 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 118, 154 |
| Conread position: | 1-237 |
| Cow position: | chr3:9630044-9629813 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 10, 95 |
| Conread position: | 1-237 |
| Cow position: | chr3:62291970-62292194 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 180, 33 |
| Conread position: | 1-238 |
| Cow position: | chr3:11919876-11920111 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 126, 60 |
| Conread position: | 1-238 |
| Cow position: | chr3:15221354-15221593 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-239 |
| Cow position: | chr3:3036760-3037002 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 104, 210 |
| Conread position: | 1-239 |
| Cow position: | chr3:18725483-18725713 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 123, 13 |
| Conread position: | 1-239 |
| Cow position: | chr3:20471201-20471439 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 20, 64 |
| Conread position: | 1-239 |
| Cow position: | chr3:26088834-26089077 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 97, 214 |
| Conread position: | 1-239 |
| Cow position: | chr3:41550214-41550451 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 14 |
| Conread position: | 1-239 |
| Cow position: | chr3:41718552-41718320 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 123, 42 |
| Conread position: | 1-239 |
| Cow position: | chr3:51492946-51492708 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 121, 89 |
| Conread position: | 1-239 |
| Cow position: | chr3:58175062-58174833 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 123, 91 |
| Conread position: | 1-239 |
| Cow position: | chr3:64319346-64319121 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 123, 48 |
| Conread position: | 1-239 |
| Cow position: | chr3:73764034-73764268 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 76, 143 |
| Conread position: | 2-135 |
| Cow position: | chr3:18865872-18866005 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 122, 15 |
| Conread position: | 2-159 |
| Cow position: | chr3:62798627-62798781 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 38 |
| Conread position: | 2-174 |
| Cow position: | chr3:48211665-48211499 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 122, 21 |
| Conread position: | 2-186 |
| Cow position: | chr3:43653956-43654133 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 49, 94 |
| Conread position: | 2-200 |
| Cow position: | chr3:891424-891231 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 122, 41 |
| Conread position: | 2-205 |
| Cow position: | chr3:25076005-25076209 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 2-212 |
| Cow position: | chr3:37485639-37485846 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 2-212 |
| Cow position: | chr3:64172602-64172390 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 2-217 |
| Cow position: | chr3:65771174-65771381 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 10, 71 |
| Conread position: | 2-220 |
| Cow position: | chr3:20092364-20092579 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 113, 122 |
| Conread position: | 2-225 |
| Cow position: | chr3:56637813-56637602 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 2-226 |
| Cow position: | chr3:61116692-61116917 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 122, 19 |
| Conread position: | 2-228 |
| Cow position: | chr3:57634425-57634195 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 94, 13 |
| Conread position: | 2-233 |
| Cow position: | chr3:26493077-26493300 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 123, 59 |
| Conread position: | 2-234 |
| Cow position: | chr3:11309980-11310212 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 125, 53 |
| Conread position: | 2-237 |
| Cow position: | chr3:27532500-27532728 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 120, 53 |
| Conread position: | 2-239 |
| Cow position: | chr3:5365845-5365604 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 197 |
| Conread position: | 2-239 |
| Cow position: | chr3:18216615-18216844 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 189, 30 |
| Conread position: | 2-239 |
| Cow position: | chr3:48629432-48629666 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 123, 38 |
| Conread position: | 2-239 |
| Cow position: | chr3:50281591-50281826 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 122, 42 |
| Conread position: | 2-239 |
| Cow position: | chr3:58764906-58765152 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 239 |
| Conread position: | 2-239 |
| Cow position: | chr3:74611728-74611491 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 86 |
| Conread position: | 3-165 |
| Cow position: | chr3:8746074-8746234 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 3-210 |
| Cow position: | chr3:2199043-2198835 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 102, 107 |
| Conread position: | 3-218 |
| Cow position: | chr3:51780836-51781045 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 3-222 |
| Cow position: | chr3:64484409-64484191 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 121, 199 |
| Conread position: | 3-223 |
| Cow position: | chr3:9074185-9074406 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 3-224 |
| Cow position: | chr3:5601008-5601228 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 121, 40 |
| Conread position: | 3-228 |
| Cow position: | chr3:62884357-62884143 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 121, 69 |
| Conread position: | 3-239 |
| Cow position: | chr3:16343770-16343523 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 102, 55 |
| Conread position: | 3-239 |
| Cow position: | chr3:58131151-58130919 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 122, 95 |
| Conread position: | 4-215 |
| Cow position: | chr3:73741710-73741922 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 121, 151 |
| Conread position: | 4-218 |
| Cow position: | chr3:23111356-23111571 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 124, 10 |
| Conread position: | 4-227 |
| Cow position: | chr3:8752944-8752724 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 121, 39 |
| Conread position: | 4-237 |
| Cow position: | chr3:77225271-77225044 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 4-239 |
| Cow position: | chr3:23091819-23092051 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 121, 94 |
| Conread position: | 4-239 |
| Cow position: | chr3:63146998-63147228 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 120, 10 |
| Conread position: | 4-239 |
| Cow position: | chr3:73436282-73436516 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 118, 10 |
| Conread position: | 5-196 |
| Cow position: | chr3:909472-909667 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 5-205 |
| Cow position: | chr3:49131904-49132106 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 5-208 |
| Cow position: | chr3:1004793-1004599 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 5-208 |
| Cow position: | chr3:61411279-61411082 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 122, 150 |
| Conread position: | 5-212 |
| Cow position: | chr3:30839401-30839200 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 5-227 |
| Cow position: | chr3:24539031-24538812 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 119, 150 |
| Conread position: | 5-229 |
| Cow position: | chr3:23945277-23945053 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 66 |
| Conread position: | 5-233 |
| Cow position: | chr3:59608655-59608432 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 122, 32 |
| Conread position: | 5-239 |
| Cow position: | chr3:12255630-12255404 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 120, 35 |
| Conread position: | 5-239 |
| Cow position: | chr3:20993972-20993737 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 119, 188 |
| Conread position: | 5-239 |
| Cow position: | chr3:50614800-50614564 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 5-239 |
| Cow position: | chr3:57829926-57830162 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 5-239 |
| Cow position: | chr3:58447909-58448135 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 119, 55 |
| Conread position: | 6-203 |
| Cow position: | chr3:22953728-22953919 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 6-233 |
| Cow position: | chr3:42480771-42480549 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 119, 77 |
| Conread position: | 6-239 |
| Cow position: | chr3:18213981-18214216 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 118, 32 |
| Conread position: | 6-239 |
| Cow position: | chr3:29507739-29507505 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 122, 92 |
| Conread position: | 6-239 |
| Cow position: | chr3:42584695-42584467 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 118, 68 |
| Conread position: | 6-239 |
| Cow position: | chr3:58973452-58973220 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 9-225 |
| Cow position: | chr3:14505760-14505975 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 115, 195 |
| Conread position: | 9-239 |
| Cow position: | chr3:56483674-56483438 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 9-239 |
| Cow position: | chr3:74846552-74846785 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 64, 220 |
| Conread position: | 11-166 |
| Cow position: | chr3:29291832-29291684 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 85 |
| Conread position: | 11-200 |
| Cow position: | chr3:22271304-22271488 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 119, 49 |
| Conread position: | 11-218 |
| Cow position: | chr3:53509543-53509749 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 127, 34 |
| Conread position: | 11-233 |
| Cow position: | chr3:54340270-54340490 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 117, 59 |
| Conread position: | 11-237 |
| Cow position: | chr3:31932953-31933170 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 114, 32 |
| Conread position: | 11-239 |
| Cow position: | chr3:55991717-55991940 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 12-239 |
| Cow position: | chr3:28238433-28238645 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 41 |
| Conread position: | 14-159 |
| Cow position: | chr3:67274975-67275126 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 99 |
| Conread position: | 14-239 |
| Cow position: | chr3:39910910-39911130 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 115, 67 |
| Conread position: | 14-239 |
| Cow position: | chr3:52835731-52835960 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 67, 71 |
| Conread position: | 15-223 |
| Cow position: | chr3:6690399-6690194 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 89, 94 |
| Conread position: | 15-239 |
| Cow position: | chr3:58291744-58291966 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 109, 140 |
| Conread position: | 19-207 |
| Cow position: | chr3:34085914-34086099 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 19-216 |
| Cow position: | chr3:10431744-10431550 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 105, 136 |
| Conread position: | 19-238 |
| Cow position: | chr3:54862278-54862487 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 19-238 |
| Cow position: | chr3:58632706-58632492 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 105, 131 |
| Conread position: | 19-239 |
| Cow position: | chr3:3736444-3736222 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 210 |
| Conread position: | 19-239 |
| Cow position: | chr3:34675867-34675647 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 105, 195 |
| Conread position: | 19-239 |
| Cow position: | chr3:54881919-54881687 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 22-238 |
| Cow position: | chr3:61009304-61009509 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 8, 22 |
| Conread position: | 23-239 |
| Cow position: | chr3:53091619-53091417 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 24-123 |
| Cow position: | chr3:76615040-76614941 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-239 |
| Cow position: | chr3:48271465-48271257 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 101, 56 |
| Conread position: | 26-126 |
| Cow position: | chr3:20878079-20878179 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-238 |
| Cow position: | chr3:53588247-53588458 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 99, 58 |
| Conread position: | 28-239 |
| Cow position: | chr3:18458531-18458733 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 28-239 |
| Cow position: | chr3:28478211-28478016 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 29-239 |
| Cow position: | chr3:25251039-25250836 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 125 |
| Conread position: | 29-239 |
| Cow position: | chr3:35278705-35278499 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 166, 63 |
| Conread position: | 33-239 |
| Cow position: | chr3:68262893-68262690 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 92, 39 |
| Conread position: | 36-183 |
| Cow position: | chr3:36204680-36204532 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 36-239 |
| Cow position: | chr3:8457782-8457581 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 40-183 |
| Cow position: | chr3:46094945-46094803 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 40-184 |
| Cow position: | chr3:75142460-75142598 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 98 |
| Conread position: | 40-225 |
| Cow position: | chr3:42563567-42563394 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 50 |
| Conread position: | 40-237 |
| Cow position: | chr3:5419740-5419934 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 115 |
| Conread position: | 40-239 |
| Cow position: | chr3:36100958-36100762 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 84, 65 |
| Conread position: | 40-239 |
| Cow position: | chr3:66707946-66708144 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 85, 24 |
| Conread position: | 42-237 |
| Cow position: | chr3:35873852-35874039 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 45-224 |
| Cow position: | chr3:37452183-37452014 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 80, 23 |
| Conread position: | 50-233 |
| Cow position: | chr3:33327823-33327638 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 78, 176 |
| Conread position: | 57-220 |
| Cow position: | chr3:4329426-4329266 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 100 |
| Conread position: | 58-216 |
| Cow position: | chr3:13909603-13909449 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 66, 99 |
| Conread position: | 81-239 |
| Cow position: | chr3:55778116-55777960 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 86-238 |
| Cow position: | chr3:15684844-15684997 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 94-238 |
| Cow position: | chr3:40629712-40629856 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 93 |
| Conread position: | 107-239 |
| Cow position: | chr3:77981260-77981393 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.