Cow genome map

Conread name: unkn-09A08GT3

Conread position: 1-104
Cow position:
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-111
Cow position:
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 86

Conread position: 1-177
Cow position:
Alignm length: 177
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 155, 0

Conread position: 1-179
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 104, 162

Conread position: 1-215
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 104, 39

Conread position: 1-217
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 208, 108

Conread position: 1-218
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 139, 62

Conread position: 1-221
Cow position:
Alignm length: 221
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 125, 0

Conread position: 1-223
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 83

Conread position: 1-225
Cow position:
Alignm length: 232
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 1-228
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 37

Conread position: 1-237
Cow position:
Alignm length: 239
Alignm identity: 162
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 116, 152

Conread position: 1-238
Cow position:
Alignm length: 244
Alignm identity: 183
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 0

Conread position: 1-238
Cow position:
Alignm length: 240
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 123, 214

Conread position: 1-239
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 124, 43

Conread position: 1-239
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 71, 24

Conread position: 1-239
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 124, 56

Conread position: 2-206
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 122, 153

Conread position: 2-208
Cow position:
Alignm length: 208
Alignm identity: 159
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 122, 0

Conread position: 2-220
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 109, 31

Conread position: 2-229
Cow position:
Alignm length: 230
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 122, 41

Conread position: 2-235
Cow position:
Alignm length: 237
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 127, 36

Conread position: 2-237
Cow position:
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 72

Conread position: 2-237
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 220

Conread position: 2-238
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 104, 38

Conread position: 2-238
Cow position:
Alignm length: 239
Alignm identity: 169
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 120, 16

Conread position: 2-239
Cow position:
Alignm length: 248
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 98, 220

Conread position: 2-239
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 123, 41

Conread position: 2-239
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 126, 16

Conread position: 2-239
Cow position:
Alignm length: 239
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 122, 12

Conread position: 2-239
Cow position:
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 77

Conread position: 3-148
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 119, 37

Conread position: 3-170
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 121, 71

Conread position: 3-176
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 3-184
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 3-185
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 118, 40

Conread position: 3-194
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 3-200
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 121, 37

Conread position: 3-205
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 122, 152

Conread position: 3-210
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 173

Conread position: 3-218
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 121, 140

Conread position: 3-229
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 46

Conread position: 3-230
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 192, 11

Conread position: 3-232
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 126, 57

Conread position: 3-233
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 56, 23

Conread position: 3-234
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 122, 11

Conread position: 3-237
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 124, 141

Conread position: 3-239
Cow position:
Alignm length: 245
Alignm identity: 165
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 3-239
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 122, 68

Conread position: 4-128
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 4-137
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 4-227
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 146

Conread position: 4-228
Cow position:
Alignm length: 226
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 210

Conread position: 4-228
Cow position:
Alignm length: 238
Alignm identity: 169
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 94, 163

Conread position: 4-239
Cow position:
Alignm length: 240
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 120, 66

Conread position: 4-239
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 11

Conread position: 4-239
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 124, 11

Conread position: 4-239
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 21, 86

Conread position: 4-239
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 5-140
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 124, 10

Conread position: 5-167
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 119, 0

Conread position: 5-183
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 123, 57

Conread position: 5-204
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 72, 102

Conread position: 5-205
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 5-214
Cow position:
Alignm length: 211
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 119, 137

Conread position: 5-218
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 5-220
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 119, 150

Conread position: 5-224
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 119, 65

Conread position: 5-233
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 119, 148

Conread position: 5-238
Cow position:
Alignm length: 234
Alignm identity: 167
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 5-239
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 100, 29

Conread position: 5-239
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 119, 150

Conread position: 5-239
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 119, 9

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 118, 0

Conread position: 6-218
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 119, 46

Conread position: 6-237
Cow position:
Alignm length: 239
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 121, 60

Conread position: 6-238
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 6-239
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 118, 0

Conread position: 9-235
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 115, 31

Conread position: 11-223
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 117, 29

Conread position: 12-239
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 112, 11

Conread position: 14-225
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 121, 99

Conread position: 14-228
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 14-232
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 44, 83

Conread position: 14-239
Cow position:
Alignm length: 238
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 60

Conread position: 15-239
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 110, 11

Conread position: 15-239
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 109, 140

Conread position: 16-194
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 16-237
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 46

Conread position: 17-198
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 112, 22

Conread position: 18-212
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 57

Conread position: 19-239
Cow position:
Alignm length: 228
Alignm identity: 170
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 41, 79

Conread position: 19-239
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 106, 196

Conread position: 21-238
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 104, 22

Conread position: 21-239
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 22-189
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 102, 131

Conread position: 23-166
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 73

Conread position: 25-189
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 60

Conread position: 26-239
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 98, 80

Conread position: 26-239
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 102, 42

Conread position: 26-239
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 98, 16

Conread position: 33-227
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 49

Conread position: 35-201
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 35-234
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 89, 106

Conread position: 37-214
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 37

Conread position: 37-228
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 62

Conread position: 40-239
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 65, 76

Conread position: 41-235
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 102

Conread position: 43-239
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 58

Conread position: 48-222
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 164

Conread position: 49-239
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 79, 108

Conread position: 56-238
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 72, 18

Conread position: 57-208
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 68, 41

Conread position: 63-205
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 37

Conread position: 86-239
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 86-239
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 26

Conread position: 87-221
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 88-226
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 123

Show alignments to all cow chromosomes.