Cow genome map
| Conread name: | unkn-12-11 |
| Conread position: | 1-194 |
| Cow position: | chr10:8325439-8325249 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 12 |
| Conread position: | 7-193 |
| Cow position: | chr10:29109307-29109121 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 167 |
| Conread position: | 7-193 |
| Cow position: | chr10:32828551-32828735 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 101, 161 |
| Conread position: | 11-193 |
| Cow position: | chr10:1379179-1379359 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 96, 160 |
| Conread position: | 14-191 |
| Cow position: | chr10:21451105-21451279 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 94, 5 |
| Conread position: | 15-155 |
| Cow position: | chr10:7280418-7280276 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 15-193 |
| Cow position: | chr10:53320563-53320388 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 71 |
| Conread position: | 20-131 |
| Cow position: | chr10:2119319-2119206 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-155 |
| Cow position: | chr10:33870977-33871114 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 20-155 |
| Cow position: | chr10:37771576-37771713 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-166 |
| Cow position: | chr10:51781749-51781602 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 65 |
| Conread position: | 20-167 |
| Cow position: | chr10:6556225-6556373 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 20-167 |
| Cow position: | chr10:25339788-25339937 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 20-167 |
| Cow position: | chr10:57555643-57555494 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 20-167 |
| Cow position: | chr10:62407090-62406941 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-170 |
| Cow position: | chr10:22102925-22103076 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 20-170 |
| Cow position: | chr10:57988304-57988151 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 20-189 |
| Cow position: | chr10:68159945-68159780 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 89, 58 |
| Conread position: | 20-191 |
| Cow position: | chr10:22346651-22346820 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 87, 150 |
| Conread position: | 20-192 |
| Cow position: | chr10:8291736-8291903 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 87, 45 |
| Conread position: | 20-192 |
| Cow position: | chr10:14334154-14333983 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-192 |
| Cow position: | chr10:29631103-29630933 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 20-192 |
| Cow position: | chr10:29732433-29732601 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 89, 27 |
| Conread position: | 20-192 |
| Cow position: | chr10:38343676-38343504 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 70, 155 |
| Conread position: | 20-193 |
| Cow position: | chr10:7896789-7896618 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr10:10172427-10172598 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr10:14805538-14805706 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 77 |
| Conread position: | 20-193 |
| Cow position: | chr10:16927361-16927533 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 81, 147 |
| Conread position: | 20-193 |
| Cow position: | chr10:17957903-17957732 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr10:19142924-19142753 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 86, 13 |
| Conread position: | 20-193 |
| Cow position: | chr10:19494595-19494426 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 131 |
| Conread position: | 20-193 |
| Cow position: | chr10:19841371-19841542 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 20-193 |
| Cow position: | chr10:22644689-22644862 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 70, 154 |
| Conread position: | 20-193 |
| Cow position: | chr10:23409558-23409387 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 20-193 |
| Cow position: | chr10:25651737-25651566 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 153 |
| Conread position: | 20-193 |
| Cow position: | chr10:28255716-28255545 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 153 |
| Conread position: | 20-193 |
| Cow position: | chr10:29844967-29844795 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 72, 152 |
| Conread position: | 20-193 |
| Cow position: | chr10:30683799-30683628 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr10:32702448-32702619 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr10:39209444-39209612 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-193 |
| Cow position: | chr10:39439844-39440014 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 137 |
| Conread position: | 20-193 |
| Cow position: | chr10:41568793-41568964 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 153 |
| Conread position: | 20-193 |
| Cow position: | chr10:41878616-41878787 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 147 |
| Conread position: | 20-194 |
| Cow position: | chr10:21739065-21738892 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 36 |
| Conread position: | 20-196 |
| Cow position: | chr10:38544200-38544033 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 94, 31 |
| Conread position: | 20-199 |
| Cow position: | chr10:40150504-40150329 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 87, 57 |
| Conread position: | 21-193 |
| Cow position: | chr10:8340658-8340822 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 87, 41 |
| Conread position: | 24-167 |
| Cow position: | chr10:41159109-41159254 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 24-192 |
| Cow position: | chr10:39778435-39778270 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 58 |
| Conread position: | 24-192 |
| Cow position: | chr10:39814703-39814537 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 83, 149 |
| Conread position: | 24-193 |
| Cow position: | chr10:34666044-34665878 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 83, 105 |
| Conread position: | 24-193 |
| Cow position: | chr10:39039620-39039453 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 83, 149 |
| Conread position: | 24-193 |
| Cow position: | chr10:48375756-48375590 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 86, 148 |
| Conread position: | 26-193 |
| Cow position: | chr10:41151037-41150872 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 147 |
| Conread position: | 26-193 |
| Cow position: | chr10:55094962-55095127 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 134 |
| Conread position: | 34-198 |
| Cow position: | chr10:31525435-31525596 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 75, 5 |
| Conread position: | 51-191 |
| Cow position: | chr10:48169150-48169288 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 58, 122 |
| Conread position: | 51-193 |
| Cow position: | chr10:38841884-38842024 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 122 |
| Conread position: | 54-192 |
| Cow position: | chr10:17434076-17434215 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 121 |
| Conread position: | 54-193 |
| Cow position: | chr10:22343190-22343327 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 117 |
Show alignments to all cow chromosomes.