Cow genome map
| Conread name: | unkn-12-11 |
| Conread position: | 1-167 |
| Cow position: | chr16:5871800-5871971 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 1-192 |
| Cow position: | chr16:25086525-25086711 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 107, 12 |
| Conread position: | 7-170 |
| Cow position: | chr16:10967189-10967020 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 32 |
| Conread position: | 7-191 |
| Cow position: | chr16:54324418-54324230 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 172 |
| Conread position: | 7-192 |
| Cow position: | chr16:18497399-18497216 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 102, 166 |
| Conread position: | 7-193 |
| Cow position: | chr16:43896345-43896163 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 100, 164 |
| Conread position: | 18-193 |
| Cow position: | chr16:40295237-40295066 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 91, 19 |
| Conread position: | 20-159 |
| Cow position: | chr16:27732452-27732311 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-162 |
| Cow position: | chr16:5527455-5527312 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 20-164 |
| Cow position: | chr16:12245421-12245276 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-167 |
| Cow position: | chr16:33455-33610 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 20-167 |
| Cow position: | chr16:5485653-5485802 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 20-167 |
| Cow position: | chr16:5662769-5662918 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 20-167 |
| Cow position: | chr16:15186009-15186157 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 62 |
| Conread position: | 20-170 |
| Cow position: | chr16:10439188-10439340 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-170 |
| Cow position: | chr16:49220987-49220836 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 88, 66 |
| Conread position: | 20-170 |
| Cow position: | chr16:51402947-51402794 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 33 |
| Conread position: | 20-190 |
| Cow position: | chr16:51085087-51085255 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 88, 139 |
| Conread position: | 20-191 |
| Cow position: | chr16:29047952-29048122 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-192 |
| Cow position: | chr16:3330859-3331029 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 20-192 |
| Cow position: | chr16:20202905-20203075 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 148 |
| Conread position: | 20-192 |
| Cow position: | chr16:23251040-23250881 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 20-192 |
| Cow position: | chr16:25342901-25343070 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 87, 121 |
| Conread position: | 20-193 |
| Cow position: | chr16:1861165-1861342 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 53, 63 |
| Conread position: | 20-193 |
| Cow position: | chr16:1959692-1959525 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 20-193 |
| Cow position: | chr16:2410004-2409833 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr16:2726285-2726114 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 81, 66 |
| Conread position: | 20-193 |
| Cow position: | chr16:3088274-3088103 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 87, 151 |
| Conread position: | 20-193 |
| Cow position: | chr16:4474676-4474501 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 160 |
| Conread position: | 20-193 |
| Cow position: | chr16:7675527-7675357 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 51 |
| Conread position: | 20-193 |
| Cow position: | chr16:8815179-8815007 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 22, 154 |
| Conread position: | 20-193 |
| Cow position: | chr16:15568187-15568358 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr16:19778722-19778551 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr16:20193242-20193071 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr16:23984229-23984403 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 70, 156 |
| Conread position: | 20-193 |
| Cow position: | chr16:25258732-25258903 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 20-193 |
| Cow position: | chr16:25442559-25442730 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 86, 153 |
| Conread position: | 20-193 |
| Cow position: | chr16:25456551-25456380 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 86, 153 |
| Conread position: | 20-193 |
| Cow position: | chr16:26664655-26664827 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 72, 154 |
| Conread position: | 20-193 |
| Cow position: | chr16:27594437-27594608 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr16:28169392-28169221 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr16:28470132-28469961 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 87, 148 |
| Conread position: | 20-193 |
| Cow position: | chr16:37479926-37479755 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 148 |
| Conread position: | 20-194 |
| Cow position: | chr16:23534971-23534798 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 87, 154 |
| Conread position: | 21-193 |
| Cow position: | chr16:5119088-5118918 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 88, 152 |
| Conread position: | 23-192 |
| Cow position: | chr16:12537019-12536851 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 144 |
| Conread position: | 24-193 |
| Cow position: | chr16:1566528-1566363 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 24-193 |
| Cow position: | chr16:2237835-2237670 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 47 |
| Conread position: | 24-193 |
| Cow position: | chr16:7465539-7465706 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 48 |
| Conread position: | 24-193 |
| Cow position: | chr16:16240359-16240193 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 34 |
| Conread position: | 24-193 |
| Cow position: | chr16:34531221-34531388 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 85, 147 |
| Conread position: | 24-199 |
| Cow position: | chr16:23809288-23809457 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 86, 61 |
| Conread position: | 25-157 |
| Cow position: | chr16:42735646-42735518 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 26-196 |
| Cow position: | chr16:4847972-4847804 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 83, 141 |
| Conread position: | 26-196 |
| Cow position: | chr16:52625250-52625419 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 80, 68 |
| Conread position: | 55-193 |
| Cow position: | chr16:22800709-22800572 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 119 |
| Conread position: | 62-164 |
| Cow position: | chr16:16537773-16537877 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 62-193 |
| Cow position: | chr16:42747248-42747119 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 24 |
Show alignments to all cow chromosomes.