Cow genome map
| Conread name: | unkn-12-11 |
| Conread position: | 1-164 |
| Cow position: | chr20:12042083-12042246 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 106, 12 |
| Conread position: | 1-192 |
| Cow position: | chr20:19214640-19214818 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-193 |
| Cow position: | chr20:13793688-13793866 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 7-170 |
| Cow position: | chr20:9344616-9344776 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 35, 43 |
| Conread position: | 7-192 |
| Cow position: | chr20:9547311-9547494 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 152 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 101, 161 |
| Conread position: | 7-193 |
| Cow position: | chr20:19341491-19341674 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 102, 158 |
| Conread position: | 7-194 |
| Cow position: | chr20:41363977-41363793 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 13 |
| Conread position: | 12-193 |
| Cow position: | chr20:23800553-23800734 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 77, 162 |
| Conread position: | 13-193 |
| Cow position: | chr20:10101349-10101173 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 96, 7 |
| Conread position: | 20-167 |
| Cow position: | chr20:8972500-8972344 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 20-167 |
| Cow position: | chr20:30429950-30430096 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 87, 131 |
| Conread position: | 20-168 |
| Cow position: | chr20:13678165-13678013 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 63, 146 |
| Conread position: | 20-192 |
| Cow position: | chr20:13764573-13764744 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 87, 154 |
| Conread position: | 20-192 |
| Cow position: | chr20:19439594-19439764 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 89, 151 |
| Conread position: | 20-192 |
| Cow position: | chr20:29950203-29950373 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr20:5536622-5536793 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr20:15096217-15096044 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 153 |
| Conread position: | 20-193 |
| Cow position: | chr20:15293658-15293830 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 154 |
| Conread position: | 20-193 |
| Cow position: | chr20:17660067-17659894 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 77, 155 |
| Conread position: | 20-193 |
| Cow position: | chr20:21916315-21916486 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 87, 148 |
| Conread position: | 20-193 |
| Cow position: | chr20:23467990-23467819 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr20:25849151-25848984 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 89, 31 |
| Conread position: | 20-193 |
| Cow position: | chr20:26054012-26053842 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 109 |
| Conread position: | 20-193 |
| Cow position: | chr20:28162503-28162674 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr20:28563902-28563727 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 157 |
| Conread position: | 21-193 |
| Cow position: | chr20:20441272-20441102 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 88, 152 |
| Conread position: | 21-193 |
| Cow position: | chr20:25899367-25899537 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 150 |
| Conread position: | 24-164 |
| Cow position: | chr20:21718116-21718257 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 24-191 |
| Cow position: | chr20:16178066-16177902 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 117 |
| Conread position: | 24-193 |
| Cow position: | chr20:824449-824616 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 85, 149 |
| Conread position: | 24-193 |
| Cow position: | chr20:15067139-15067296 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 85, 22 |
| Conread position: | 24-193 |
| Cow position: | chr20:30687267-30687430 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 123 |
| Conread position: | 29-191 |
| Cow position: | chr20:24615221-24615062 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 60-192 |
| Cow position: | chr20:12692777-12692908 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 113 |
Show alignments to all cow chromosomes.