Cow genome map
| Conread name: | unkn-12-11 |
| Conread position: | 5-192 |
| Cow position: | chr21:41885772-41885586 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 103, 168 |
| Conread position: | 7-163 |
| Cow position: | chr21:26648935-26648779 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 102, 70 |
| Conread position: | 7-191 |
| Cow position: | chr21:31250770-31250952 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 7-193 |
| Cow position: | chr21:18816477-18816297 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 102, 49 |
| Conread position: | 15-190 |
| Cow position: | chr21:24085017-24084844 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 57 |
| Conread position: | 15-192 |
| Cow position: | chr21:47942730-47942907 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 160 |
| Conread position: | 20-146 |
| Cow position: | chr21:10851867-10851995 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-146 |
| Cow position: | chr21:38802227-38802355 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 70, 60 |
| Conread position: | 20-152 |
| Cow position: | chr21:42915597-42915731 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-164 |
| Cow position: | chr21:10568488-10568634 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-167 |
| Cow position: | chr21:19612550-19612699 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-167 |
| Cow position: | chr21:26635367-26635218 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-167 |
| Cow position: | chr21:37373016-37373165 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 20-170 |
| Cow position: | chr21:2539288-2539137 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 87, 67 |
| Conread position: | 20-191 |
| Cow position: | chr21:9893759-9893926 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 20-191 |
| Cow position: | chr21:26836980-26837149 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 82, 151 |
| Conread position: | 20-191 |
| Cow position: | chr21:47647121-47647291 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 24, 154 |
| Conread position: | 20-192 |
| Cow position: | chr21:468687-468860 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 88, 155 |
| Conread position: | 20-192 |
| Cow position: | chr21:45783225-45783394 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 88, 30 |
| Conread position: | 20-193 |
| Cow position: | chr21:2417994-2418165 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 20-193 |
| Cow position: | chr21:5018930-5019103 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 155 |
| Conread position: | 20-193 |
| Cow position: | chr21:7591448-7591617 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 89, 58 |
| Conread position: | 20-193 |
| Cow position: | chr21:13298383-13298548 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 87, 16 |
| Conread position: | 20-193 |
| Cow position: | chr21:27069174-27069003 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 85, 153 |
| Conread position: | 20-193 |
| Cow position: | chr21:27150270-27150445 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 85, 157 |
| Conread position: | 20-193 |
| Cow position: | chr21:28257212-28257382 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 89, 52 |
| Conread position: | 20-193 |
| Cow position: | chr21:30597680-30597509 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 81, 36 |
| Conread position: | 20-193 |
| Cow position: | chr21:31514526-31514356 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 87, 152 |
| Conread position: | 20-193 |
| Cow position: | chr21:39426854-39427025 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 153 |
| Conread position: | 20-193 |
| Cow position: | chr21:44764165-44763993 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 81, 154 |
| Conread position: | 20-194 |
| Cow position: | chr21:3780563-3780736 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 154 |
| Conread position: | 20-194 |
| Cow position: | chr21:40269882-40269710 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 89, 153 |
| Conread position: | 20-198 |
| Cow position: | chr21:4588225-4588051 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 88, 121 |
| Conread position: | 21-157 |
| Cow position: | chr21:361464-361601 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 88, 18 |
| Conread position: | 21-162 |
| Cow position: | chr21:33710940-33711083 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 21-193 |
| Cow position: | chr21:1194227-1194397 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 86, 152 |
| Conread position: | 21-193 |
| Cow position: | chr21:2512640-2512810 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 86, 152 |
| Conread position: | 21-193 |
| Cow position: | chr21:6414233-6414063 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 88, 150 |
| Conread position: | 24-193 |
| Cow position: | chr21:34655622-34655791 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 68, 151 |
| Conread position: | 26-146 |
| Cow position: | chr21:2712697-2712814 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 82, 19 |
| Conread position: | 26-193 |
| Cow position: | chr21:2880030-2879868 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 30-199 |
| Cow position: | chr21:7154131-7154300 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 60, 145 |
| Conread position: | 34-193 |
| Cow position: | chr21:30563468-30563625 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 73, 139 |
| Conread position: | 68-192 |
| Cow position: | chr21:28614151-28614274 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 105 |
| Conread position: | 75-193 |
| Cow position: | chr21:30873-30989 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 98 |
Show alignments to all cow chromosomes.