Cow genome map
| Conread name: | unkn-12-11 |
| Conread position: | 1-179 |
| Cow position: | chr22:11807139-11806963 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 105, 12 |
| Conread position: | 1-182 |
| Cow position: | chr22:37135365-37135544 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 108, 12 |
| Conread position: | 1-190 |
| Cow position: | chr22:1313405-1313219 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 107, 23 |
| Conread position: | 1-192 |
| Cow position: | chr22:1281133-1280945 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 105, 12 |
| Conread position: | 1-193 |
| Cow position: | chr22:6501312-6501126 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 109, 12 |
| Conread position: | 7-147 |
| Cow position: | chr22:34601198-34601334 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 102, 27 |
| Conread position: | 7-181 |
| Cow position: | chr22:29011670-29011496 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 83, 159 |
| Conread position: | 7-193 |
| Cow position: | chr22:3803786-3803970 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 13-164 |
| Cow position: | chr22:21034778-21034630 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 13-170 |
| Cow position: | chr22:31333437-31333278 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 18-164 |
| Cow position: | chr22:46614917-46615067 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 20-147 |
| Cow position: | chr22:8325873-8326002 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 20-147 |
| Cow position: | chr22:44459271-44459404 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 20-159 |
| Cow position: | chr22:1323769-1323910 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 20-167 |
| Cow position: | chr22:6022271-6022418 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 59 |
| Conread position: | 20-167 |
| Cow position: | chr22:16202532-16202680 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 44 |
| Conread position: | 20-167 |
| Cow position: | chr22:20239220-20239071 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-170 |
| Cow position: | chr22:17326839-17326687 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 20-171 |
| Cow position: | chr22:38551487-38551638 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 88, 19 |
| Conread position: | 20-172 |
| Cow position: | chr22:21194879-21194724 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 20-190 |
| Cow position: | chr22:30129199-30129366 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 20-190 |
| Cow position: | chr22:30146848-30147015 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 89, 59 |
| Conread position: | 20-190 |
| Cow position: | chr22:44348248-44348076 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 89, 52 |
| Conread position: | 20-192 |
| Cow position: | chr22:559090-558921 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 89, 143 |
| Conread position: | 20-192 |
| Cow position: | chr22:1519415-1519244 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 154 |
| Conread position: | 20-192 |
| Cow position: | chr22:8880716-8880886 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 20-192 |
| Cow position: | chr22:13774135-13774304 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 89, 64 |
| Conread position: | 20-192 |
| Cow position: | chr22:15853041-15853209 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 90, 150 |
| Conread position: | 20-192 |
| Cow position: | chr22:34169954-34170123 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 87, 77 |
| Conread position: | 20-192 |
| Cow position: | chr22:39467899-39467726 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 155 |
| Conread position: | 20-192 |
| Cow position: | chr22:44935581-44935751 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 153 |
| Conread position: | 20-193 |
| Cow position: | chr22:297069-297237 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 20-193 |
| Cow position: | chr22:325556-325384 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 20-193 |
| Cow position: | chr22:695231-695409 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 58, 160 |
| Conread position: | 20-193 |
| Cow position: | chr22:1880423-1880594 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 89, 151 |
| Conread position: | 20-193 |
| Cow position: | chr22:3276738-3276567 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 20-193 |
| Cow position: | chr22:8736731-8736574 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 32 |
| Conread position: | 20-193 |
| Cow position: | chr22:11803434-11803264 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 113 |
| Conread position: | 20-193 |
| Cow position: | chr22:15310339-15310168 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr22:18028888-18029059 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr22:21591041-21591212 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 86, 153 |
| Conread position: | 20-193 |
| Cow position: | chr22:28783732-28783903 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 148 |
| Conread position: | 20-193 |
| Cow position: | chr22:29499159-29499330 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr22:30677095-30676924 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 20-193 |
| Cow position: | chr22:35670052-35669881 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr22:36859929-36859759 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 10 |
| Conread position: | 20-193 |
| Cow position: | chr22:37292059-37291887 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 75, 154 |
| Conread position: | 20-193 |
| Cow position: | chr22:44367863-44367692 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 153 |
| Conread position: | 20-193 |
| Cow position: | chr22:44398048-44398219 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr22:44492667-44492838 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr22:48274724-48274555 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 89, 64 |
| Conread position: | 20-194 |
| Cow position: | chr22:42992794-42992960 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 26 |
| Conread position: | 20-200 |
| Cow position: | chr22:10908217-10908036 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 60 |
| Conread position: | 21-193 |
| Cow position: | chr22:21336574-21336744 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 86, 150 |
| Conread position: | 21-193 |
| Cow position: | chr22:32283062-32282892 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 86, 150 |
| Conread position: | 24-192 |
| Cow position: | chr22:538731-538898 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 85, 149 |
| Conread position: | 24-193 |
| Cow position: | chr22:2849967-2849801 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 85, 116 |
| Conread position: | 24-193 |
| Cow position: | chr22:18605178-18605011 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 149 |
| Conread position: | 24-193 |
| Cow position: | chr22:19142065-19141900 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 73 |
| Conread position: | 24-193 |
| Cow position: | chr22:29853476-29853643 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 24, 31 |
| Conread position: | 24-193 |
| Cow position: | chr22:45014965-45015135 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 12, 152 |
| Conread position: | 25-193 |
| Cow position: | chr22:5313912-5314078 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 28 |
| Conread position: | 25-199 |
| Cow position: | chr22:1862030-1862198 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 26-192 |
| Cow position: | chr22:23752084-23751922 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 26-194 |
| Cow position: | chr22:46584944-46584778 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 81, 144 |
| Conread position: | 27-190 |
| Cow position: | chr22:15955402-15955245 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 83, 72 |
| Conread position: | 28-193 |
| Cow position: | chr22:2563132-2562969 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 142 |
| Conread position: | 36-193 |
| Cow position: | chr22:29037296-29037451 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 72, 135 |
| Conread position: | 37-192 |
| Cow position: | chr22:44478354-44478507 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 131 |
Show alignments to all cow chromosomes.