Cow genome map
| Conread name: | unkn-12-11 |
| Conread position: | 7-193 |
| Cow position: | chr29:21422080-21421899 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 138, 72 |
| Conread position: | 12-164 |
| Cow position: | chr29:42804011-42804165 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 12-193 |
| Cow position: | chr29:5236641-5236823 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 78, 164 |
| Conread position: | 13-193 |
| Cow position: | chr29:38228599-38228776 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 18-170 |
| Cow position: | chr29:19655244-19655398 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 20-151 |
| Cow position: | chr29:5959203-5959336 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-154 |
| Cow position: | chr29:16345840-16345975 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 88, 121 |
| Conread position: | 20-154 |
| Cow position: | chr29:45461374-45461510 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-157 |
| Cow position: | chr29:36634755-36634617 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 88, 75 |
| Conread position: | 20-164 |
| Cow position: | chr29:40501379-40501233 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 20-167 |
| Cow position: | chr29:13622230-13622081 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 20-167 |
| Cow position: | chr29:19526658-19526509 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 20-167 |
| Cow position: | chr29:27979293-27979144 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 20-191 |
| Cow position: | chr29:7429492-7429323 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-191 |
| Cow position: | chr29:13851243-13851081 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 89, 26 |
| Conread position: | 20-192 |
| Cow position: | chr29:13018318-13018489 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 87, 148 |
| Conread position: | 20-192 |
| Cow position: | chr29:14209924-14209753 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 150 |
| Conread position: | 20-192 |
| Cow position: | chr29:31183030-31183200 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 82, 153 |
| Conread position: | 20-192 |
| Cow position: | chr29:32287874-32288044 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-192 |
| Cow position: | chr29:39078083-39077913 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 88, 131 |
| Conread position: | 20-193 |
| Cow position: | chr29:46833-46662 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr29:409631-409463 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 34 |
| Conread position: | 20-193 |
| Cow position: | chr29:609020-608849 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr29:2465248-2465077 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 82, 148 |
| Conread position: | 20-193 |
| Cow position: | chr29:2691790-2691961 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr29:2839715-2839542 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 70, 124 |
| Conread position: | 20-193 |
| Cow position: | chr29:6264372-6264200 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 89, 154 |
| Conread position: | 20-193 |
| Cow position: | chr29:9641157-9640985 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 146 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr29:10645782-10645612 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 89, 31 |
| Conread position: | 20-193 |
| Cow position: | chr29:10822294-10822119 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 66 |
| Conread position: | 20-193 |
| Cow position: | chr29:16024191-16024362 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr29:16172477-16172309 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 62 |
| Conread position: | 20-193 |
| Cow position: | chr29:19621644-19621468 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 70, 158 |
| Conread position: | 20-193 |
| Cow position: | chr29:21431224-21431056 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 120 |
| Conread position: | 20-193 |
| Cow position: | chr29:23977751-23977922 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr29:26163205-26163037 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 87, 109 |
| Conread position: | 20-193 |
| Cow position: | chr29:32558123-32557952 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 35 |
| Conread position: | 20-193 |
| Cow position: | chr29:34798183-34798012 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 87, 62 |
| Conread position: | 20-193 |
| Cow position: | chr29:35298538-35298709 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr29:38207036-38206865 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 87, 148 |
| Conread position: | 20-193 |
| Cow position: | chr29:43325144-43325316 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 87, 154 |
| Conread position: | 20-193 |
| Cow position: | chr29:45206158-45206329 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-194 |
| Cow position: | chr29:14452494-14452665 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 21-193 |
| Cow position: | chr29:7846019-7846189 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 86, 152 |
| Conread position: | 21-193 |
| Cow position: | chr29:10022703-10022533 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 150 |
| Conread position: | 21-193 |
| Cow position: | chr29:13583710-13583880 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 149 |
| Conread position: | 21-193 |
| Cow position: | chr29:27180124-27179954 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 150 |
| Conread position: | 24-191 |
| Cow position: | chr29:32541726-32541892 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 85, 149 |
| Conread position: | 24-192 |
| Cow position: | chr29:25930889-25930720 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 66, 152 |
| Conread position: | 24-193 |
| Cow position: | chr29:2101471-2101637 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 90, 148 |
| Conread position: | 24-193 |
| Cow position: | chr29:8665137-8665308 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 80 |
| Conread position: | 24-193 |
| Cow position: | chr29:17406756-17406923 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 149 |
| Conread position: | 24-193 |
| Cow position: | chr29:19889218-19889382 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 85, 62 |
| Conread position: | 25-192 |
| Cow position: | chr29:9082254-9082088 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 83, 148 |
| Conread position: | 26-193 |
| Cow position: | chr29:647440-647606 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 68, 148 |
| Conread position: | 26-193 |
| Cow position: | chr29:8625560-8625396 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 83, 60 |
| Conread position: | 30-193 |
| Cow position: | chr29:27812721-27812882 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 78, 141 |
| Conread position: | 52-192 |
| Cow position: | chr29:27261521-27261382 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 122 |
| Conread position: | 54-167 |
| Cow position: | chr29:31095916-31095801 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 64-193 |
| Cow position: | chr29:16688507-16688634 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 109 |
Show alignments to all cow chromosomes.