Cow genome map

Conread name: unkn-12-11

Conread position: 1-128
Cow position: chr3:64356439-64356312 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 12

Conread position: 1-192
Cow position: chr3:24354672-24354860 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 15

Conread position: 1-192
Cow position: chr3:65208712-65208890 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 108, 12

Conread position: 2-193
Cow position: chr3:59863090-59863277 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 11

Conread position: 7-192
Cow position: chr3:15188340-15188524 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 74, 65

Conread position: 7-193
Cow position: chr3:6687318-6687508 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 102, 185

Conread position: 7-193
Cow position: chr3:27864705-27864886 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 103, 73

Conread position: 11-192
Cow position: chr3:24444566-24444387 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 162

Conread position: 11-193
Cow position: chr3:50916873-50917051 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 9

Conread position: 12-191
Cow position: chr3:38494773-38494953 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 27

Conread position: 12-192
Cow position: chr3:5993552-5993373 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 95, 155

Conread position: 15-193
Cow position: chr3:10242192-10242368 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 92, 153

Conread position: 20-138
Cow position: chr3:7478371-7478251 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 20-146
Cow position: chr3:31416560-31416688 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 20-147
Cow position: chr3:58949073-58949200 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 61

Conread position: 20-162
Cow position: chr3:1742875-1743019 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 20-164
Cow position: chr3:2509331-2509188 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 88, 131

Conread position: 20-164
Cow position: chr3:56146848-56146994 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 20-167
Cow position: chr3:3524555-3524704 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 71, 60

Conread position: 20-167
Cow position: chr3:7248078-7248225 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 87, 22

Conread position: 20-167
Cow position: chr3:18860961-18861114 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 20-167
Cow position: chr3:19880188-19880337 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 20-167
Cow position: chr3:29575580-29575431 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 20-167
Cow position: chr3:34029377-34029227 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 20-167
Cow position: chr3:56327651-56327799 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 89, 120

Conread position: 20-167
Cow position: chr3:66889426-66889275 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 20-167
Cow position: chr3:68872211-68872062 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 30, 35

Conread position: 20-170
Cow position: chr3:48057817-48057665 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 20-185
Cow position: chr3:25687790-25687954 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 67

Conread position: 20-191
Cow position: chr3:15054162-15053997 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 132

Conread position: 20-192
Cow position: chr3:595670-595840 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 87, 151

Conread position: 20-192
Cow position: chr3:3058550-3058719 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 59

Conread position: 20-192
Cow position: chr3:4029276-4029446 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 88, 153

Conread position: 20-192
Cow position: chr3:32621497-32621328 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 46

Conread position: 20-192
Cow position: chr3:78025877-78025708 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 89, 152

Conread position: 20-193
Cow position: chr3:2709326-2709155 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr3:2870332-2870503 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 82, 153

Conread position: 20-193
Cow position: chr3:2919008-2919179 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 35

Conread position: 20-193
Cow position: chr3:5952643-5952472 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr3:6783912-6784080 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 120

Conread position: 20-193
Cow position: chr3:7157176-7157004 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 24, 154

Conread position: 20-193
Cow position: chr3:13725241-13725070 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 87, 148

Conread position: 20-193
Cow position: chr3:16224429-16224600 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr3:18813042-18813214 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 153

Conread position: 20-193
Cow position: chr3:19799635-19799464 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 35

Conread position: 20-193
Cow position: chr3:20382580-20382750 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 89, 34

Conread position: 20-193
Cow position: chr3:21181154-21180983 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr3:23206330-23206161 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 91, 77

Conread position: 20-193
Cow position: chr3:30316090-30316262 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 154

Conread position: 20-193
Cow position: chr3:36862914-36862743 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 156

Conread position: 20-193
Cow position: chr3:37970590-37970760 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 87, 120

Conread position: 20-193
Cow position: chr3:38868131-38868306 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 157

Conread position: 20-193
Cow position: chr3:40338604-40338433 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 153

Conread position: 20-193
Cow position: chr3:43191748-43191577 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr3:44925606-44925778 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 154

Conread position: 20-193
Cow position: chr3:45976042-45976212 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 149

Conread position: 20-193
Cow position: chr3:46504093-46504264 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 148

Conread position: 20-193
Cow position: chr3:46859750-46859579 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 156

Conread position: 20-193
Cow position: chr3:49136022-49135850 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 154

Conread position: 20-193
Cow position: chr3:53517153-53517324 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr3:56295729-56295900 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr3:57483182-57483011 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr3:63240700-63240529 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 88, 153

Conread position: 20-193
Cow position: chr3:64026594-64026423 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 35

Conread position: 20-193
Cow position: chr3:64652152-64652323 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 89, 153

Conread position: 20-193
Cow position: chr3:66621740-66621910 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 140

Conread position: 20-193
Cow position: chr3:68698429-68698260 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 89, 38

Conread position: 20-193
Cow position: chr3:68891027-68890862 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 60

Conread position: 20-193
Cow position: chr3:69932290-69932119 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 153

Conread position: 20-193
Cow position: chr3:72631601-72631772 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 72

Conread position: 20-193
Cow position: chr3:74059070-74059240 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 34

Conread position: 20-194
Cow position: chr3:40824935-40825108 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 152

Conread position: 21-192
Cow position: chr3:34505808-34505639 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 150

Conread position: 21-193
Cow position: chr3:4287631-4287801 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 144

Conread position: 21-193
Cow position: chr3:51857146-51856976 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 86, 152

Conread position: 21-193
Cow position: chr3:58784611-58784441 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 86, 150

Conread position: 24-167
Cow position: chr3:36877113-36876968 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 134

Conread position: 24-167
Cow position: chr3:45034287-45034432 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 31

Conread position: 24-170
Cow position: chr3:32200564-32200712 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 24-190
Cow position: chr3:64015835-64015672 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 83, 131

Conread position: 24-192
Cow position: chr3:23288787-23288619 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 150

Conread position: 24-193
Cow position: chr3:29329742-29329575 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 83, 149

Conread position: 24-193
Cow position: chr3:49543664-49543497 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 149

Conread position: 26-192
Cow position: chr3:3839967-3839803 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 83, 25

Conread position: 26-192
Cow position: chr3:54291032-54290868 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 114

Conread position: 26-193
Cow position: chr3:19755414-19755249 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 147

Conread position: 31-193
Cow position: chr3:19945804-19945962 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 77, 136

Conread position: 51-193
Cow position: chr3:39024446-39024587 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 121

Conread position: 51-193
Cow position: chr3:67656487-67656625 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 120

Show alignments to all cow chromosomes.