Cow genome map
| Conread name: | unkn-12-11 |
| Conread position: | 7-184 |
| Cow position: | chr4:43867528-43867704 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 102, 161 |
| Conread position: | 7-192 |
| Cow position: | chr4:19004998-19004814 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 76, 167 |
| Conread position: | 12-191 |
| Cow position: | chr4:8702888-8703068 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 25, 141 |
| Conread position: | 15-192 |
| Cow position: | chr4:6489024-6488851 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 79, 71 |
| Conread position: | 20-151 |
| Cow position: | chr4:42405962-42406095 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 20-151 |
| Cow position: | chr4:44779873-44779741 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 66 |
| Conread position: | 20-167 |
| Cow position: | chr4:4417399-4417547 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 99 |
| Conread position: | 20-167 |
| Cow position: | chr4:9355726-9355875 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-167 |
| Cow position: | chr4:28653148-28652999 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 20-167 |
| Cow position: | chr4:65665065-65664916 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-170 |
| Cow position: | chr4:16639957-16640109 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-170 |
| Cow position: | chr4:43882452-43882601 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 87, 109 |
| Conread position: | 20-185 |
| Cow position: | chr4:1929295-1929128 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 20-190 |
| Cow position: | chr4:1952220-1952053 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 20-191 |
| Cow position: | chr4:6267844-6267674 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-191 |
| Cow position: | chr4:60262818-60262654 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 58 |
| Conread position: | 20-192 |
| Cow position: | chr4:160504-160674 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 20-192 |
| Cow position: | chr4:3127158-3127328 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 87, 100 |
| Conread position: | 20-192 |
| Cow position: | chr4:17092516-17092347 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 88, 40 |
| Conread position: | 20-193 |
| Cow position: | chr4:98870-98695 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 80, 19 |
| Conread position: | 20-193 |
| Cow position: | chr4:357252-357423 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 89, 153 |
| Conread position: | 20-193 |
| Cow position: | chr4:530765-530936 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 20-193 |
| Cow position: | chr4:1048917-1048746 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 20-193 |
| Cow position: | chr4:3356586-3356416 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 87, 77 |
| Conread position: | 20-193 |
| Cow position: | chr4:5443478-5443307 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr4:5881502-5881673 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 20-193 |
| Cow position: | chr4:6567726-6567897 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 20-193 |
| Cow position: | chr4:6865161-6864990 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 20-193 |
| Cow position: | chr4:11109728-11109556 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 95, 74 |
| Conread position: | 20-193 |
| Cow position: | chr4:12239877-12239716 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 20-193 |
| Cow position: | chr4:13494679-13494850 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 153 |
| Conread position: | 20-193 |
| Cow position: | chr4:14387168-14387340 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 21, 154 |
| Conread position: | 20-193 |
| Cow position: | chr4:17924614-17924443 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr4:18338201-18338371 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 20-193 |
| Cow position: | chr4:18423174-18423004 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 20-193 |
| Cow position: | chr4:20236051-20235880 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 70, 121 |
| Conread position: | 20-193 |
| Cow position: | chr4:20241866-20242037 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 70, 121 |
| Conread position: | 20-193 |
| Cow position: | chr4:25598138-25597968 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 53 |
| Conread position: | 20-193 |
| Cow position: | chr4:28833063-28833232 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 58 |
| Conread position: | 20-193 |
| Cow position: | chr4:30472560-30472731 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 89, 153 |
| Conread position: | 20-193 |
| Cow position: | chr4:32213519-32213690 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 91, 148 |
| Conread position: | 20-193 |
| Cow position: | chr4:33071495-33071321 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 156 |
| Conread position: | 20-193 |
| Cow position: | chr4:33494902-33495073 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr4:36897723-36897891 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 109 |
| Conread position: | 20-193 |
| Cow position: | chr4:41956110-41956281 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr4:41960246-41960417 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 86, 153 |
| Conread position: | 20-193 |
| Cow position: | chr4:43318289-43318118 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 87, 148 |
| Conread position: | 20-193 |
| Cow position: | chr4:44726925-44727096 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr4:44741918-44741746 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 20-193 |
| Cow position: | chr4:46666267-46666427 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 20-193 |
| Cow position: | chr4:57985338-57985509 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 20-193 |
| Cow position: | chr4:67682544-67682716 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 81, 154 |
| Conread position: | 20-193 |
| Cow position: | chr4:68837650-68837479 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 20-194 |
| Cow position: | chr4:26876441-26876270 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 87, 139 |
| Conread position: | 20-194 |
| Cow position: | chr4:43898195-43898019 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 157 |
| Conread position: | 21-147 |
| Cow position: | chr4:17244454-17244582 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 21-185 |
| Cow position: | chr4:65222412-65222249 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 86, 150 |
| Conread position: | 21-193 |
| Cow position: | chr4:827556-827726 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 86, 150 |
| Conread position: | 21-193 |
| Cow position: | chr4:17501983-17501813 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 86, 150 |
| Conread position: | 24-192 |
| Cow position: | chr4:57958302-57958469 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 24-193 |
| Cow position: | chr4:16060629-16060797 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 150 |
| Conread position: | 24-193 |
| Cow position: | chr4:41191281-41191113 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 81, 142 |
| Conread position: | 28-192 |
| Cow position: | chr4:34183322-34183160 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 81, 29 |
| Conread position: | 28-193 |
| Cow position: | chr4:14139726-14139890 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 80, 138 |
| Conread position: | 29-193 |
| Cow position: | chr4:15460909-15460747 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 142 |
| Conread position: | 54-193 |
| Cow position: | chr4:27296405-27296271 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 87 |
| Conread position: | 58-193 |
| Cow position: | chr4:7731067-7730935 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 69-193 |
| Cow position: | chr4:28175956-28175835 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 102 |
| Conread position: | 80-194 |
| Cow position: | chr4:25912843-25912954 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 89 |
Show alignments to all cow chromosomes.