Cow genome map

Conread name: unkn-12-11

Conread position: 1-185
Cow position: chr6:10645290-10645472 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 14

Conread position: 1-185
Cow position: chr6:11269874-11269695 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 107, 12

Conread position: 1-192
Cow position: chr6:58066285-58066474 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 83, 12

Conread position: 2-192
Cow position: chr6:58028297-58028478 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 11

Conread position: 7-170
Cow position: chr6:12627273-12627438 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 7-170
Cow position: chr6:58602054-58602219 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 45

Conread position: 7-191
Cow position: chr6:26777594-26777412 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 47

Conread position: 7-193
Cow position: chr6:10250033-10249849 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 101, 161

Conread position: 7-193
Cow position: chr6:15139599-15139415 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 88, 164

Conread position: 7-193
Cow position: chr6:65843190-65843374 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 102, 166

Conread position: 12-193
Cow position: chr6:477118-477298 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 162

Conread position: 12-193
Cow position: chr6:51716112-51716291 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 95, 161

Conread position: 15-191
Cow position: chr6:10610427-10610600 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 93, 71

Conread position: 20-154
Cow position: chr6:2376262-2376398 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 20-162
Cow position: chr6:59617678-59617821 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 20-163
Cow position: chr6:7139753-7139608 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 35

Conread position: 20-164
Cow position: chr6:12664733-12664587 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 20-164
Cow position: chr6:21974257-21974403 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 20-164
Cow position: chr6:40327006-40327152 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 60

Conread position: 20-164
Cow position: chr6:44002259-44002405 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 20-167
Cow position: chr6:5749512-5749661 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 35

Conread position: 20-167
Cow position: chr6:21835609-21835462 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 59

Conread position: 20-167
Cow position: chr6:26669275-26669126 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 20-167
Cow position: chr6:28489981-28489833 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 34

Conread position: 20-167
Cow position: chr6:62663304-62663453 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 20-170
Cow position: chr6:57471255-57471407 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 88, 120

Conread position: 20-191
Cow position: chr6:8759710-8759536 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 158

Conread position: 20-191
Cow position: chr6:38273156-38273325 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 142
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 88, 153

Conread position: 20-191
Cow position: chr6:64717907-64718078 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 70, 150

Conread position: 20-192
Cow position: chr6:703799-703969 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 88, 156

Conread position: 20-192
Cow position: chr6:3486837-3486667 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 152

Conread position: 20-192
Cow position: chr6:3887930-3887759 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 154

Conread position: 20-192
Cow position: chr6:11723611-11723441 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 89, 153

Conread position: 20-192
Cow position: chr6:28170496-28170666 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 82, 148

Conread position: 20-192
Cow position: chr6:50111406-50111575 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 109

Conread position: 20-192
Cow position: chr6:51731668-51731836 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 87, 129

Conread position: 20-192
Cow position: chr6:52694614-52694783 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 89, 31

Conread position: 20-193
Cow position: chr6:50018-49847 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 153

Conread position: 20-193
Cow position: chr6:183955-183784 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr6:329878-329707 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 23, 35

Conread position: 20-193
Cow position: chr6:1409794-1409624 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 64

Conread position: 20-193
Cow position: chr6:1821039-1820870 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 89, 12

Conread position: 20-193
Cow position: chr6:2877096-2876926 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 89, 64

Conread position: 20-193
Cow position: chr6:8203777-8203953 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 158

Conread position: 20-193
Cow position: chr6:16591544-16591715 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr6:16599203-16599377 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 150

Conread position: 20-193
Cow position: chr6:17047928-17048099 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 151

Conread position: 20-193
Cow position: chr6:24240992-24241163 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr6:27171168-27171338 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 24, 35

Conread position: 20-193
Cow position: chr6:27474017-27474188 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 87, 151

Conread position: 20-193
Cow position: chr6:28187250-28187080 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 34

Conread position: 20-193
Cow position: chr6:30273306-30273135 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr6:34890539-34890372 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 90, 134

Conread position: 20-193
Cow position: chr6:35418718-35418550 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 81

Conread position: 20-193
Cow position: chr6:35875123-35874955 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 109

Conread position: 20-193
Cow position: chr6:39333285-39333111 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 151

Conread position: 20-193
Cow position: chr6:39910919-39911087 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 131

Conread position: 20-193
Cow position: chr6:40276670-40276841 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 22, 35

Conread position: 20-193
Cow position: chr6:40552993-40552823 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 31

Conread position: 20-193
Cow position: chr6:43619311-43619482 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 35

Conread position: 20-193
Cow position: chr6:44148961-44148790 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 91, 151

Conread position: 20-193
Cow position: chr6:45587535-45587706 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 89, 151

Conread position: 20-193
Cow position: chr6:53543684-53543855 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 153

Conread position: 20-193
Cow position: chr6:55541668-55541501 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 64

Conread position: 20-193
Cow position: chr6:59594493-59594661 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 89, 19

Conread position: 20-193
Cow position: chr6:65907201-65907030 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 78

Conread position: 20-193
Cow position: chr6:68028734-68028905 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 153

Conread position: 20-194
Cow position: chr6:1534991-1534823 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 13

Conread position: 20-194
Cow position: chr6:5948192-5948019 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 81, 154

Conread position: 20-195
Cow position: chr6:915218-915392 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 19

Conread position: 20-196
Cow position: chr6:18972876-18972708 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 20-197
Cow position: chr6:50636458-50636636 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 74, 52

Conread position: 20-199
Cow position: chr6:25792169-25791993 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 89, 66

Conread position: 21-167
Cow position: chr6:17596707-17596559 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 21-192
Cow position: chr6:3572183-3572353 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 150

Conread position: 21-192
Cow position: chr6:40379042-40378873 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 89, 65

Conread position: 21-192
Cow position: chr6:40865737-40865568 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 18

Conread position: 21-193
Cow position: chr6:14390517-14390687 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 86, 150

Conread position: 21-193
Cow position: chr6:28642950-28642780 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 86, 150

Conread position: 21-193
Cow position: chr6:62578611-62578440 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 86, 153

Conread position: 21-203
Cow position: chr6:10680005-10680186 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 88, 61

Conread position: 24-167
Cow position: chr6:28703118-28702973 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 24-191
Cow position: chr6:44261888-44261723 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 81, 142

Conread position: 24-193
Cow position: chr6:36528789-36528956 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 83, 149

Conread position: 24-193
Cow position: chr6:67213683-67213516 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 83, 149

Conread position: 24-196
Cow position: chr6:18985670-18985837 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 84, 67

Conread position: 26-193
Cow position: chr6:27528426-27528261 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 82, 147

Conread position: 26-193
Cow position: chr6:41229037-41229202 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 81, 147

Conread position: 27-193
Cow position: chr6:3150830-3150994 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 146

Conread position: 27-193
Cow position: chr6:65897348-65897190 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 50

Conread position: 36-185
Cow position: chr6:34196934-34197079 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 115

Conread position: 52-193
Cow position: chr6:10339022-10338887 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 54-169
Cow position: chr6:16054019-16054136 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Show alignments to all cow chromosomes.