Cow genome map

Conread name: unkn-12-11

Conread position: 1-170
Cow position: chr9:13474275-13474101 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 12

Conread position: 1-170
Cow position: chr9:54681247-54681079 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 12

Conread position: 7-194
Cow position: chr9:5005489-5005674 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 100, 161

Conread position: 12-159
Cow position: chr9:20939820-20939967 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 96, 22

Conread position: 20-159
Cow position: chr9:28001041-28001182 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 89, 0

Conread position: 20-164
Cow position: chr9:17062867-17062723 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 59

Conread position: 20-164
Cow position: chr9:37969692-37969546 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 20-167
Cow position: chr9:1074659-1074510 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 20-167
Cow position: chr9:3804866-3805015 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 126
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 33

Conread position: 20-167
Cow position: chr9:18508309-18508160 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 20-167
Cow position: chr9:45875034-45875180 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 66

Conread position: 20-167
Cow position: chr9:51212198-51212348 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 20-170
Cow position: chr9:30673896-30674048 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 20-191
Cow position: chr9:827593-827423 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 35

Conread position: 20-191
Cow position: chr9:31090694-31090864 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 80, 128

Conread position: 20-192
Cow position: chr9:6250801-6250972 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 151

Conread position: 20-192
Cow position: chr9:19158016-19157842 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 157

Conread position: 20-192
Cow position: chr9:29789171-29788999 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 151

Conread position: 20-192
Cow position: chr9:31066235-31066405 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 35

Conread position: 20-192
Cow position: chr9:34769660-34769831 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 70, 154

Conread position: 20-192
Cow position: chr9:37161297-37161130 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 87, 109

Conread position: 20-192
Cow position: chr9:48149788-48149959 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 89, 147

Conread position: 20-193
Cow position: chr9:129676-129508 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 63

Conread position: 20-193
Cow position: chr9:1994890-1994719 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr9:4942291-4942116 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 89, 169

Conread position: 20-193
Cow position: chr9:6709475-6709646 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr9:7004250-7004421 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr9:9014587-9014758 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 87, 148

Conread position: 20-193
Cow position: chr9:14001574-14001743 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 89, 64

Conread position: 20-193
Cow position: chr9:16177108-16177275 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 71

Conread position: 20-193
Cow position: chr9:17304459-17304288 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 87, 151

Conread position: 20-193
Cow position: chr9:17312896-17313063 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 57

Conread position: 20-193
Cow position: chr9:21410822-21410993 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr9:25034044-25033879 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 35

Conread position: 20-193
Cow position: chr9:25188607-25188784 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 88, 40

Conread position: 20-193
Cow position: chr9:26083043-26082873 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 89, 145

Conread position: 20-193
Cow position: chr9:27036417-27036588 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 148

Conread position: 20-193
Cow position: chr9:30828258-30828428 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 87, 120

Conread position: 20-193
Cow position: chr9:31809092-31809264 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 87, 154

Conread position: 20-193
Cow position: chr9:38677661-38677832 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 89, 151

Conread position: 20-193
Cow position: chr9:44819653-44819821 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 20-193
Cow position: chr9:47004248-47004419 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr9:47043477-47043648 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 87, 153

Conread position: 20-193
Cow position: chr9:51180663-51180492 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 87, 151

Conread position: 20-193
Cow position: chr9:64015155-64014984 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 153

Conread position: 20-194
Cow position: chr9:22436469-22436639 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 88, 62

Conread position: 20-200
Cow position: chr9:43665184-43665358 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 88, 131

Conread position: 21-163
Cow position: chr9:10976633-10976777 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 21-193
Cow position: chr9:203776-203606 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 152

Conread position: 21-193
Cow position: chr9:8781410-8781240 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 86, 150

Conread position: 21-193
Cow position: chr9:25904041-25904209 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 13

Conread position: 21-193
Cow position: chr9:50093719-50093549 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 86, 150

Conread position: 24-164
Cow position: chr9:27935901-27936043 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 24-191
Cow position: chr9:27783706-27783871 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 149

Conread position: 24-193
Cow position: chr9:1250477-1250310 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 149

Conread position: 24-193
Cow position: chr9:3310135-3310302 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 83, 147

Conread position: 24-193
Cow position: chr9:28023321-28023487 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 48

Conread position: 24-193
Cow position: chr9:56302931-56302764 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 83, 149

Conread position: 24-194
Cow position: chr9:650504-650336 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 84, 149

Conread position: 24-199
Cow position: chr9:52721956-52722129 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 86, 149

Conread position: 26-163
Cow position: chr9:9707640-9707780 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 26-167
Cow position: chr9:779299-779156 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 26-193
Cow position: chr9:46041729-46041564 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 140

Conread position: 26-193
Cow position: chr9:50792238-50792403 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 83, 144

Conread position: 27-191
Cow position: chr9:1982351-1982511 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 81, 9

Conread position: 28-193
Cow position: chr9:29026402-29026237 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 147

Conread position: 29-191
Cow position: chr9:2000623-2000461 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 69

Conread position: 55-163
Cow position: chr9:26568147-26568257 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 56-193
Cow position: chr9:7060512-7060378 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 41

Conread position: 67-193
Cow position: chr9:31112689-31112813 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 101

Show alignments to all cow chromosomes.