Cow genome map
Conread name: | unkn-54-2 |
Conread position: | 1-187 |
Cow position: | chr10:31005851-31006030 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 140 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 178, 15 |
Conread position: | 1-314 |
Cow position: | chr10:69935643-69935940 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 11 |
Conread position: | 3-217 |
Cow position: | chr10:31669733-31669521 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 164 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 112, 88 |
Conread position: | 3-319 |
Cow position: | chr10:29106360-29106663 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 88 |
Conread position: | 3-319 |
Cow position: | chr10:31734147-31733834 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 60 |
Conread position: | 4-319 |
Cow position: | chr10:1380960-1380649 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 37 |
Conread position: | 4-319 |
Cow position: | chr10:16646847-16647157 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 89 |
Conread position: | 5-167 |
Cow position: | chr10:43288918-43289071 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 128 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 5-186 |
Cow position: | chr10:9799054-9799230 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 142 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 163, 71 |
Conread position: | 5-187 |
Cow position: | chr10:15753823-15753645 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 141 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 131, 86 |
Conread position: | 5-209 |
Cow position: | chr10:24930-24730 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 160 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 13, 9 |
Conread position: | 5-215 |
Cow position: | chr10:53157959-53158163 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 157 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 5-220 |
Cow position: | chr10:62405332-62405542 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 165 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 131, 86 |
Conread position: | 5-242 |
Cow position: | chr10:19894466-19894240 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 184 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 164, 86 |
Conread position: | 5-243 |
Cow position: | chr10:21414045-21414278 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 86 |
Conread position: | 5-255 |
Cow position: | chr10:44866338-44866091 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 196 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 37, 89 |
Conread position: | 5-256 |
Cow position: | chr10:23648829-23649077 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-287 |
Cow position: | chr10:25005728-25005451 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 85 |
Conread position: | 5-307 |
Cow position: | chr10:24297033-24297338 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 5-307 |
Cow position: | chr10:42112255-42111958 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 86 |
Conread position: | 5-307 |
Cow position: | chr10:45648319-45648022 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 86 |
Conread position: | 5-315 |
Cow position: | chr10:17491943-17492252 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 87 |
Conread position: | 5-315 |
Cow position: | chr10:25341570-25341267 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 86 |
Conread position: | 5-315 |
Cow position: | chr10:51558864-51558557 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-318 |
Cow position: | chr10:64347428-64347124 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 86 |
Conread position: | 5-319 |
Cow position: | chr10:325298-325605 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 52 |
Conread position: | 5-319 |
Cow position: | chr10:326553-326248 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 52 |
Conread position: | 5-319 |
Cow position: | chr10:2116985-2117289 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr10:7278640-7278948 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 85 |
Conread position: | 5-319 |
Cow position: | chr10:8293594-8293282 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 85 |
Conread position: | 5-319 |
Cow position: | chr10:8459687-8459379 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 85 |
Conread position: | 5-319 |
Cow position: | chr10:14332377-14332688 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr10:16929627-16929316 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr10:21490401-21490091 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 85 |
Conread position: | 5-319 |
Cow position: | chr10:28030472-28030781 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 64 |
Conread position: | 5-319 |
Cow position: | chr10:31527161-31526864 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 87 |
Conread position: | 5-319 |
Cow position: | chr10:32282478-32282167 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr10:32704226-32703915 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr10:37041459-37041158 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 85 |
Conread position: | 5-319 |
Cow position: | chr10:37773343-37773032 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 86 |
Conread position: | 5-319 |
Cow position: | chr10:39037587-39037898 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr10:40737139-40736840 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 75 |
Conread position: | 5-319 |
Cow position: | chr10:44765152-44764841 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 86 |
Conread position: | 5-322 |
Cow position: | chr10:29174688-29174374 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 85 |
Conread position: | 8-314 |
Cow position: | chr10:66495940-66496244 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 84 |
Conread position: | 8-319 |
Cow position: | chr10:20388355-20388651 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 83 |
Conread position: | 8-319 |
Cow position: | chr10:23412507-23412199 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 82 |
Conread position: | 9-319 |
Cow position: | chr10:2736475-2736168 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 83 |
Conread position: | 11-224 |
Cow position: | chr10:4640899-4641108 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 79 |
Conread position: | 11-307 |
Cow position: | chr10:11623270-11623561 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 80 |
Conread position: | 15-314 |
Cow position: | chr10:57986244-57986538 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 21 |
Conread position: | 17-306 |
Cow position: | chr10:49311490-49311193 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 214 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 61, 156 |
Conread position: | 18-306 |
Cow position: | chr10:31374965-31375247 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 73 |
Conread position: | 18-306 |
Cow position: | chr10:63881689-63881402 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 73 |
Conread position: | 18-319 |
Cow position: | chr10:55098500-55098791 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 218 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 151, 30 |
Conread position: | 20-257 |
Cow position: | chr10:28568882-28568650 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 71 |
Conread position: | 20-275 |
Cow position: | chr10:14904665-14904411 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 73 |
Conread position: | 20-311 |
Cow position: | chr10:59173619-59173899 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 72 |
Conread position: | 20-319 |
Cow position: | chr10:48384776-48385072 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 49 |
Conread position: | 20-319 |
Cow position: | chr10:50016931-50017212 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 219 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 149, 53 |
Conread position: | 23-250 |
Cow position: | chr10:19069235-19069012 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 25 |
Conread position: | 23-319 |
Cow position: | chr10:28235950-28235657 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 67 |
Conread position: | 30-265 |
Cow position: | chr10:67580362-67580583 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 175 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 139, 36 |
Conread position: | 32-319 |
Cow position: | chr10:30682056-30682341 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 58 |
Conread position: | 38-320 |
Cow position: | chr10:38519967-38520254 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 55-319 |
Cow position: | chr10:61312898-61312641 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 36 |
Conread position: | 119-319 |
Cow position: | chr10:41405731-41405529 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 160 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.