Cow genome map

Conread name: unkn-54-2

Conread position: 1-187
Cow position: chr10:31005851-31006030 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 178, 15

Conread position: 1-314
Cow position: chr10:69935643-69935940 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 11

Conread position: 3-217
Cow position: chr10:31669733-31669521 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 112, 88

Conread position: 3-319
Cow position: chr10:29106360-29106663 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 88

Conread position: 3-319
Cow position: chr10:31734147-31733834 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 60

Conread position: 4-319
Cow position: chr10:1380960-1380649 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 37

Conread position: 4-319
Cow position: chr10:16646847-16647157 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 89

Conread position: 5-167
Cow position: chr10:43288918-43289071 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 5-186
Cow position: chr10:9799054-9799230 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 163, 71

Conread position: 5-187
Cow position: chr10:15753823-15753645 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 131, 86

Conread position: 5-209
Cow position: chr10:24930-24730 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 9

Conread position: 5-215
Cow position: chr10:53157959-53158163 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 85, 0

Conread position: 5-220
Cow position: chr10:62405332-62405542 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 131, 86

Conread position: 5-242
Cow position: chr10:19894466-19894240 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 164, 86

Conread position: 5-243
Cow position: chr10:21414045-21414278 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 86

Conread position: 5-255
Cow position: chr10:44866338-44866091 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 37, 89

Conread position: 5-256
Cow position: chr10:23648829-23649077 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 85

Conread position: 5-287
Cow position: chr10:25005728-25005451 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 85

Conread position: 5-307
Cow position: chr10:24297033-24297338 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 5-307
Cow position: chr10:42112255-42111958 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 86

Conread position: 5-307
Cow position: chr10:45648319-45648022 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 86

Conread position: 5-315
Cow position: chr10:17491943-17492252 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 87

Conread position: 5-315
Cow position: chr10:25341570-25341267 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 86

Conread position: 5-315
Cow position: chr10:51558864-51558557 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 85

Conread position: 5-318
Cow position: chr10:64347428-64347124 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 86

Conread position: 5-319
Cow position: chr10:325298-325605 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 52

Conread position: 5-319
Cow position: chr10:326553-326248 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 52

Conread position: 5-319
Cow position: chr10:2116985-2117289 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 85

Conread position: 5-319
Cow position: chr10:7278640-7278948 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 85

Conread position: 5-319
Cow position: chr10:8293594-8293282 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 85

Conread position: 5-319
Cow position: chr10:8459687-8459379 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 85

Conread position: 5-319
Cow position: chr10:14332377-14332688 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 85

Conread position: 5-319
Cow position: chr10:16929627-16929316 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 85

Conread position: 5-319
Cow position: chr10:21490401-21490091 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 85

Conread position: 5-319
Cow position: chr10:28030472-28030781 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 64

Conread position: 5-319
Cow position: chr10:31527161-31526864 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 87

Conread position: 5-319
Cow position: chr10:32282478-32282167 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 85

Conread position: 5-319
Cow position: chr10:32704226-32703915 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 85

Conread position: 5-319
Cow position: chr10:37041459-37041158 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 85

Conread position: 5-319
Cow position: chr10:37773343-37773032 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 86

Conread position: 5-319
Cow position: chr10:39037587-39037898 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 85

Conread position: 5-319
Cow position: chr10:40737139-40736840 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 75

Conread position: 5-319
Cow position: chr10:44765152-44764841 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 86

Conread position: 5-322
Cow position: chr10:29174688-29174374 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 85

Conread position: 8-314
Cow position: chr10:66495940-66496244 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 84

Conread position: 8-319
Cow position: chr10:20388355-20388651 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 83

Conread position: 8-319
Cow position: chr10:23412507-23412199 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 82

Conread position: 9-319
Cow position: chr10:2736475-2736168 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 83

Conread position: 11-224
Cow position: chr10:4640899-4641108 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 79

Conread position: 11-307
Cow position: chr10:11623270-11623561 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 80

Conread position: 15-314
Cow position: chr10:57986244-57986538 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 21

Conread position: 17-306
Cow position: chr10:49311490-49311193 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 156

Conread position: 18-306
Cow position: chr10:31374965-31375247 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 73

Conread position: 18-306
Cow position: chr10:63881689-63881402 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 73

Conread position: 18-319
Cow position: chr10:55098500-55098791 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 151, 30

Conread position: 20-257
Cow position: chr10:28568882-28568650 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 71

Conread position: 20-275
Cow position: chr10:14904665-14904411 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 73

Conread position: 20-311
Cow position: chr10:59173619-59173899 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 72

Conread position: 20-319
Cow position: chr10:48384776-48385072 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 49

Conread position: 20-319
Cow position: chr10:50016931-50017212 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 149, 53

Conread position: 23-250
Cow position: chr10:19069235-19069012 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 25

Conread position: 23-319
Cow position: chr10:28235950-28235657 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 67

Conread position: 30-265
Cow position: chr10:67580362-67580583 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 139, 36

Conread position: 32-319
Cow position: chr10:30682056-30682341 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 58

Conread position: 38-320
Cow position: chr10:38519967-38520254 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 55-319
Cow position: chr10:61312898-61312641 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 36

Conread position: 119-319
Cow position: chr10:41405731-41405529 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.