Cow genome map
| Conread name: | unkn-54-2 |
| Conread position: | 5-182 |
| Cow position: | chr12:6186764-6186934 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 163, 84 |
| Conread position: | 5-185 |
| Cow position: | chr12:23475136-23474962 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 131, 86 |
| Conread position: | 5-257 |
| Cow position: | chr12:31328944-31329194 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-307 |
| Cow position: | chr12:3180794-3180501 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-307 |
| Cow position: | chr12:3716888-3717187 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-315 |
| Cow position: | chr12:12754772-12755078 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 47 |
| Conread position: | 5-315 |
| Cow position: | chr12:27506264-27506571 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr12:1408203-1407906 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 85 |
| Conread position: | 5-319 |
| Cow position: | chr12:10931470-10931160 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 85 |
| Conread position: | 5-319 |
| Cow position: | chr12:20459337-20459644 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 80 |
| Conread position: | 5-319 |
| Cow position: | chr12:22202296-22202593 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr12:41337847-41338158 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 83 |
| Conread position: | 8-224 |
| Cow position: | chr12:24205912-24205705 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 161, 40 |
| Conread position: | 8-231 |
| Cow position: | chr12:26869875-26870094 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 8-281 |
| Cow position: | chr12:23159128-23159389 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 216, 70 |
| Conread position: | 8-295 |
| Cow position: | chr12:28571759-28571483 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 22 |
| Conread position: | 8-315 |
| Cow position: | chr12:21862055-21862349 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 23 |
| Conread position: | 8-319 |
| Cow position: | chr12:9988305-9988612 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 61 |
| Conread position: | 8-319 |
| Cow position: | chr12:11582541-11582244 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 26 |
| Conread position: | 8-319 |
| Cow position: | chr12:27929409-27929717 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 83 |
| Conread position: | 8-319 |
| Cow position: | chr12:42232692-42232384 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 8-319 |
| Cow position: | chr12:42856149-42856457 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 22 |
| Conread position: | 9-198 |
| Cow position: | chr12:8172286-8172106 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 159, 27 |
| Conread position: | 9-307 |
| Cow position: | chr12:35311527-35311826 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 64 |
| Conread position: | 10-319 |
| Cow position: | chr12:21610983-21610678 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 81 |
| Conread position: | 17-315 |
| Cow position: | chr12:21718807-21719098 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 19 |
| Conread position: | 18-280 |
| Cow position: | chr12:21057341-21057594 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 208, 16 |
| Conread position: | 18-307 |
| Cow position: | chr12:19871586-19871298 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 72 |
| Conread position: | 22-319 |
| Cow position: | chr12:1774556-1774843 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 68 |
| Conread position: | 30-286 |
| Cow position: | chr12:27435798-27436042 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 30-319 |
| Cow position: | chr12:27994461-27994175 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 61 |
| Conread position: | 89-319 |
| Cow position: | chr12:15939559-15939787 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 70 |
| Conread position: | 96-319 |
| Cow position: | chr12:27852642-27852870 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 100-245 |
| Cow position: | chr12:20317610-20317461 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 67, 107 |
| Conread position: | 102-319 |
| Cow position: | chr12:758714-758495 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 183 |
Show alignments to all cow chromosomes.