Cow genome map
| Conread name: | unkn-54-2 |
| Conread position: | 5-189 |
| Cow position: | chr13:28414112-28414292 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-195 |
| Cow position: | chr13:15446835-15447014 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 5-215 |
| Cow position: | chr13:32152610-32152812 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-237 |
| Cow position: | chr13:11822116-11822331 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 164, 52 |
| Conread position: | 5-260 |
| Cow position: | chr13:52860059-52860310 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 79 |
| Conread position: | 5-262 |
| Cow position: | chr13:15280464-15280210 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 87 |
| Conread position: | 5-307 |
| Cow position: | chr13:41337504-41337791 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 31 |
| Conread position: | 5-314 |
| Cow position: | chr13:2725630-2725939 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 85 |
| Conread position: | 5-314 |
| Cow position: | chr13:3021308-3021614 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 86 |
| Conread position: | 5-314 |
| Cow position: | chr13:58313509-58313203 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 86 |
| Conread position: | 5-319 |
| Cow position: | chr13:4944567-4944256 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr13:9048772-9048461 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr13:11795523-11795833 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 91 |
| Conread position: | 5-319 |
| Cow position: | chr13:14399898-14400211 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 86 |
| Conread position: | 5-319 |
| Cow position: | chr13:16248764-16249076 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-319 |
| Cow position: | chr13:18329948-18330259 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr13:30468941-30469249 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-319 |
| Cow position: | chr13:31510321-31510010 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 87 |
| Conread position: | 5-319 |
| Cow position: | chr13:33333205-33333515 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 85 |
| Conread position: | 5-319 |
| Cow position: | chr13:34298757-34298446 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 81 |
| Conread position: | 5-319 |
| Cow position: | chr13:34345479-34345170 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr13:34905403-34905708 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 87 |
| Conread position: | 5-319 |
| Cow position: | chr13:43974776-43975085 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 9 |
| Conread position: | 5-321 |
| Cow position: | chr13:34871137-34870824 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 80 |
| Conread position: | 5-322 |
| Cow position: | chr13:60426207-60425895 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 91 |
| Conread position: | 8-319 |
| Cow position: | chr13:5229801-5230099 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 81 |
| Conread position: | 8-319 |
| Cow position: | chr13:33162115-33161807 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 82 |
| Conread position: | 8-324 |
| Cow position: | chr13:42088308-42088606 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 42 |
| Conread position: | 9-319 |
| Cow position: | chr13:9301330-9301036 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 46 |
| Conread position: | 9-319 |
| Cow position: | chr13:54238275-54238585 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 11-319 |
| Cow position: | chr13:13903027-13902723 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 79 |
| Conread position: | 18-314 |
| Cow position: | chr13:14302822-14303113 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 72 |
| Conread position: | 18-319 |
| Cow position: | chr13:3784291-3784002 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 151, 25 |
| Conread position: | 18-319 |
| Cow position: | chr13:7609308-7609010 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 51 |
| Conread position: | 18-321 |
| Cow position: | chr13:22715064-22714764 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 20-247 |
| Cow position: | chr13:49805780-49806004 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 71 |
| Conread position: | 25-305 |
| Cow position: | chr13:42114836-42115114 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 66 |
| Conread position: | 25-321 |
| Cow position: | chr13:58740731-58740441 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 26-315 |
| Cow position: | chr13:20563826-20564113 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 64 |
| Conread position: | 26-322 |
| Cow position: | chr13:20571553-20571847 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 65 |
| Conread position: | 32-319 |
| Cow position: | chr13:32549903-32549625 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 26 |
| Conread position: | 36-321 |
| Cow position: | chr13:52459023-52459297 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 55 |
| Conread position: | 38-238 |
| Cow position: | chr13:30243471-30243274 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 52 |
| Conread position: | 57-319 |
| Cow position: | chr13:34321853-34322108 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 76, 18 |
| Conread position: | 61-319 |
| Cow position: | chr13:33500809-33501073 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 67-216 |
| Cow position: | chr13:29721636-29721491 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 102, 24 |
| Conread position: | 92-319 |
| Cow position: | chr13:25694595-25694365 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 94-319 |
| Cow position: | chr13:5622604-5622833 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 96-319 |
| Cow position: | chr13:30306277-30306052 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
Show alignments to all cow chromosomes.