Cow genome map
| Conread name: | unkn-54-2 |
| Conread position: | 4-319 |
| Cow position: | chr14:193197-192886 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 86 |
| Conread position: | 4-319 |
| Cow position: | chr14:16916679-16916991 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 86 |
| Conread position: | 5-163 |
| Cow position: | chr14:38016597-38016444 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 5-188 |
| Cow position: | chr14:18497026-18496856 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 5-205 |
| Cow position: | chr14:14786270-14786465 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 161, 79 |
| Conread position: | 5-215 |
| Cow position: | chr14:34370579-34370374 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 155, 29 |
| Conread position: | 5-220 |
| Cow position: | chr14:46225226-46225016 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 164, 69 |
| Conread position: | 5-280 |
| Cow position: | chr14:37883044-37882768 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 25 |
| Conread position: | 5-315 |
| Cow position: | chr14:12740002-12740309 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-315 |
| Cow position: | chr14:15272218-15272522 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 85 |
| Conread position: | 5-319 |
| Cow position: | chr14:5500974-5500664 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 25 |
| Conread position: | 5-319 |
| Cow position: | chr14:7475903-7475593 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 75 |
| Conread position: | 5-319 |
| Cow position: | chr14:8998665-8998351 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 85 |
| Conread position: | 5-319 |
| Cow position: | chr14:11150869-11151180 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr14:12833897-12833588 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr14:12903379-12903070 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 13 |
| Conread position: | 5-319 |
| Cow position: | chr14:13308777-13308468 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr14:13581916-13581606 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 87 |
| Conread position: | 5-319 |
| Cow position: | chr14:27040339-27040647 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 85 |
| Conread position: | 5-319 |
| Cow position: | chr14:30476297-30476605 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 25 |
| Conread position: | 5-319 |
| Cow position: | chr14:32583983-32584289 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 85 |
| Conread position: | 5-319 |
| Cow position: | chr14:35382452-35382738 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 162, 61 |
| Conread position: | 5-319 |
| Cow position: | chr14:41220001-41220312 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-319 |
| Cow position: | chr14:41446058-41445741 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 89 |
| Conread position: | 5-319 |
| Cow position: | chr14:45739278-45739586 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 41 |
| Conread position: | 5-319 |
| Cow position: | chr14:48251407-48251712 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr14:48828271-48827941 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 46, 42 |
| Conread position: | 5-320 |
| Cow position: | chr14:13769249-13769556 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 61 |
| Conread position: | 5-321 |
| Cow position: | chr14:8884835-8885147 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 8-279 |
| Cow position: | chr14:28796543-28796801 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 161, 53 |
| Conread position: | 8-293 |
| Cow position: | chr14:44554884-44554607 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 55 |
| Conread position: | 8-314 |
| Cow position: | chr14:41478788-41478490 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 21 |
| Conread position: | 8-319 |
| Cow position: | chr14:21200965-21200658 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 83 |
| Conread position: | 8-319 |
| Cow position: | chr14:49995501-49995807 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 82 |
| Conread position: | 9-256 |
| Cow position: | chr14:45084954-45084714 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 160, 82 |
| Conread position: | 9-257 |
| Cow position: | chr14:20786427-20786182 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 81 |
| Conread position: | 9-319 |
| Cow position: | chr14:16996995-16997302 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 81 |
| Conread position: | 9-319 |
| Cow position: | chr14:28993305-28993612 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 81 |
| Conread position: | 9-319 |
| Cow position: | chr14:32449999-32449705 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 81 |
| Conread position: | 9-319 |
| Cow position: | chr14:44026773-44027080 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 69 |
| Conread position: | 9-322 |
| Cow position: | chr14:34906568-34906259 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 82 |
| Conread position: | 16-319 |
| Cow position: | chr14:424221-423922 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 18-214 |
| Cow position: | chr14:11474288-11474478 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 115, 67 |
| Conread position: | 19-307 |
| Cow position: | chr14:44382311-44382028 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 72 |
| Conread position: | 23-315 |
| Cow position: | chr14:50028791-50029078 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 146, 44 |
| Conread position: | 23-319 |
| Cow position: | chr14:17690157-17689864 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 67 |
| Conread position: | 23-319 |
| Cow position: | chr14:50145257-50144962 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 68 |
| Conread position: | 30-286 |
| Cow position: | chr14:32471884-32472131 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 61 |
| Conread position: | 30-319 |
| Cow position: | chr14:8900251-8900540 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 61 |
| Conread position: | 47-315 |
| Cow position: | chr14:50114371-50114107 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 15 |
| Conread position: | 73-307 |
| Cow position: | chr14:46124088-46123862 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 18 |
| Conread position: | 91-319 |
| Cow position: | chr14:28208317-28208547 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 75 |
| Conread position: | 96-319 |
| Cow position: | chr14:20774124-20773901 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 63 |
| Conread position: | 111-284 |
| Cow position: | chr14:38380524-38380698 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 115, 55 |
Show alignments to all cow chromosomes.