Cow genome map
| Conread name: | unkn-54-2 |
| Conread position: | 5-172 |
| Cow position: | chr15:24569002-24569165 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-188 |
| Cow position: | chr15:22096018-22096195 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 164, 15 |
| Conread position: | 5-213 |
| Cow position: | chr15:42727428-42727230 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 164, 24 |
| Conread position: | 5-225 |
| Cow position: | chr15:25436025-25436239 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 164, 87 |
| Conread position: | 5-234 |
| Cow position: | chr15:4712958-4712732 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-255 |
| Cow position: | chr15:18661537-18661291 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 25 |
| Conread position: | 5-257 |
| Cow position: | chr15:29884263-29884509 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 221, 87 |
| Conread position: | 5-276 |
| Cow position: | chr15:38937817-38937551 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 57 |
| Conread position: | 5-289 |
| Cow position: | chr15:14578362-14578633 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 61 |
| Conread position: | 5-301 |
| Cow position: | chr15:609066-609361 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 30 |
| Conread position: | 5-307 |
| Cow position: | chr15:4629195-4629485 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 86 |
| Conread position: | 5-313 |
| Cow position: | chr15:4642251-4641949 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 85 |
| Conread position: | 5-314 |
| Cow position: | chr15:17074311-17074617 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 87 |
| Conread position: | 5-315 |
| Cow position: | chr15:12417664-12417964 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 60 |
| Conread position: | 5-315 |
| Cow position: | chr15:20413625-20413319 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 85 |
| Conread position: | 5-315 |
| Cow position: | chr15:37382538-37382845 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-315 |
| Cow position: | chr15:42533101-42532794 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 83 |
| Conread position: | 5-316 |
| Cow position: | chr15:32689878-32690189 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 84 |
| Conread position: | 5-319 |
| Cow position: | chr15:2080382-2080071 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr15:4388798-4388487 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 85 |
| Conread position: | 5-319 |
| Cow position: | chr15:5197401-5197090 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 5-319 |
| Cow position: | chr15:5243002-5243290 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 163, 84 |
| Conread position: | 5-319 |
| Cow position: | chr15:6120430-6120117 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 87 |
| Conread position: | 5-319 |
| Cow position: | chr15:6164053-6164353 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 86 |
| Conread position: | 5-319 |
| Cow position: | chr15:6331167-6330867 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 25 |
| Conread position: | 5-319 |
| Cow position: | chr15:7271390-7271077 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr15:7319616-7319306 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr15:7841370-7841074 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr15:15344057-15344363 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 38 |
| Conread position: | 5-319 |
| Cow position: | chr15:18579773-18579466 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 85 |
| Conread position: | 5-319 |
| Cow position: | chr15:19734748-19735059 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr15:21533086-21533397 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 86 |
| Conread position: | 5-319 |
| Cow position: | chr15:21662690-21663002 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr15:21825916-21825605 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr15:27747469-27747780 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr15:32490839-32491148 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 85 |
| Conread position: | 5-319 |
| Cow position: | chr15:37373076-37373384 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 86 |
| Conread position: | 5-319 |
| Cow position: | chr15:42939962-42939656 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 84 |
| Conread position: | 5-319 |
| Cow position: | chr15:44073496-44073187 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr15:44378568-44378261 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 86 |
| Conread position: | 5-319 |
| Cow position: | chr15:50344685-50344990 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 86 |
| Conread position: | 5-321 |
| Cow position: | chr15:51220794-51220480 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 64 |
| Conread position: | 5-322 |
| Cow position: | chr15:21607825-21607512 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 8-314 |
| Cow position: | chr15:31585350-31585653 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 83 |
| Conread position: | 8-315 |
| Cow position: | chr15:13076567-13076263 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 83 |
| Conread position: | 9-203 |
| Cow position: | chr15:6367443-6367630 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 141, 22 |
| Conread position: | 9-318 |
| Cow position: | chr15:9522152-9522459 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 82 |
| Conread position: | 9-319 |
| Cow position: | chr15:6081740-6081437 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 22 |
| Conread position: | 10-247 |
| Cow position: | chr15:45292364-45292131 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 81 |
| Conread position: | 10-319 |
| Cow position: | chr15:44364311-44364615 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 82 |
| Conread position: | 13-319 |
| Cow position: | chr15:35643416-35643711 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 60 |
| Conread position: | 18-315 |
| Cow position: | chr15:1601605-1601313 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 221 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 151, 45 |
| Conread position: | 18-319 |
| Cow position: | chr15:4077095-4077389 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 73 |
| Conread position: | 19-319 |
| Cow position: | chr15:8102486-8102196 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 207, 62 |
| Conread position: | 20-203 |
| Cow position: | chr15:7574838-7574658 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 20-319 |
| Cow position: | chr15:25554177-25553883 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 43 |
| Conread position: | 20-319 |
| Cow position: | chr15:38983697-38983401 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 71 |
| Conread position: | 21-216 |
| Cow position: | chr15:3653041-3653232 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 23-319 |
| Cow position: | chr15:5498090-5497800 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 68 |
| Conread position: | 24-319 |
| Cow position: | chr15:36622630-36622922 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 65 |
| Conread position: | 32-319 |
| Cow position: | chr15:4728188-4727910 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 58 |
| Conread position: | 80-306 |
| Cow position: | chr15:32858846-32858619 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 12 |
| Conread position: | 85-301 |
| Cow position: | chr15:32697721-32697509 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 73, 82 |
Show alignments to all cow chromosomes.