Cow genome map
| Conread name: | unkn-54-2 |
| Conread position: | 5-152 |
| Cow position: | chr20:35036925-35037067 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 131, 85 |
| Conread position: | 5-247 |
| Cow position: | chr20:7995088-7995327 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 86 |
| Conread position: | 5-258 |
| Cow position: | chr20:37271725-37271476 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 87 |
| Conread position: | 5-305 |
| Cow position: | chr20:22222149-22222447 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 48 |
| Conread position: | 5-314 |
| Cow position: | chr20:18092446-18092752 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 52 |
| Conread position: | 5-314 |
| Cow position: | chr20:30579318-30579012 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 87 |
| Conread position: | 5-315 |
| Cow position: | chr20:14720901-14721230 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 5-315 |
| Cow position: | chr20:27876939-27876629 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 31 |
| Conread position: | 5-315 |
| Cow position: | chr20:34968438-34968130 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 87 |
| Conread position: | 5-319 |
| Cow position: | chr20:6550543-6550854 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 85 |
| Conread position: | 5-319 |
| Cow position: | chr20:9536350-9536049 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 86 |
| Conread position: | 5-319 |
| Cow position: | chr20:10921471-10921778 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 71 |
| Conread position: | 5-319 |
| Cow position: | chr20:12434945-12435253 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr20:15089917-15090228 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr20:15295473-15295164 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 85 |
| Conread position: | 5-319 |
| Cow position: | chr20:19017957-19018260 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 75 |
| Conread position: | 5-319 |
| Cow position: | chr20:30689328-30689019 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 38 |
| Conread position: | 5-319 |
| Cow position: | chr20:34643464-34643161 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 74 |
| Conread position: | 5-321 |
| Cow position: | chr20:7597402-7597715 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 8-209 |
| Cow position: | chr20:14327164-14327359 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 123, 55 |
| Conread position: | 8-218 |
| Cow position: | chr20:6055279-6055478 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 161, 81 |
| Conread position: | 8-250 |
| Cow position: | chr20:23802602-23802363 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 82 |
| Conread position: | 9-319 |
| Cow position: | chr20:19845226-19844921 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 82 |
| Conread position: | 13-319 |
| Cow position: | chr20:37104053-37104355 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 262, 78 |
| Conread position: | 16-314 |
| Cow position: | chr20:28294765-28294461 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 17-319 |
| Cow position: | chr20:14210943-14211234 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 33 |
| Conread position: | 18-319 |
| Cow position: | chr20:13653898-13654186 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 48 |
| Conread position: | 18-319 |
| Cow position: | chr20:24399423-24399721 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 73 |
| Conread position: | 19-262 |
| Cow position: | chr20:20935696-20935929 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 72 |
| Conread position: | 20-315 |
| Cow position: | chr20:14756825-14757122 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 72 |
| Conread position: | 20-319 |
| Cow position: | chr20:15068256-15067958 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 20-321 |
| Cow position: | chr20:12996803-12997125 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 69, 160 |
| Conread position: | 25-319 |
| Cow position: | chr20:12567880-12568172 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 66-319 |
| Cow position: | chr20:14741580-14741331 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 25 |
| Conread position: | 92-287 |
| Cow position: | chr20:16944870-16944675 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 77, 68 |
| Conread position: | 96-315 |
| Cow position: | chr20:5538541-5538330 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 71, 146 |
| Conread position: | 96-319 |
| Cow position: | chr20:25845256-25845479 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 92 |
| Conread position: | 97-300 |
| Cow position: | chr20:30816465-30816671 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
Show alignments to all cow chromosomes.