Cow genome map
| Conread name: | unkn-54-2 |
| Conread position: | 1-279 |
| Cow position: | chr27:13316946-13316678 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 8 |
| Conread position: | 4-322 |
| Cow position: | chr27:8201322-8201010 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 86 |
| Conread position: | 5-175 |
| Cow position: | chr27:526321-526155 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 162, 86 |
| Conread position: | 5-185 |
| Cow position: | chr27:12239454-12239278 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-214 |
| Cow position: | chr27:21350233-21350029 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-231 |
| Cow position: | chr27:15866917-15867132 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 160, 30 |
| Conread position: | 5-245 |
| Cow position: | chr27:14380689-14380453 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 26 |
| Conread position: | 5-247 |
| Cow position: | chr27:2331889-2331650 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-315 |
| Cow position: | chr27:21451829-21451524 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 86 |
| Conread position: | 5-319 |
| Cow position: | chr27:344544-344848 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-319 |
| Cow position: | chr27:1189048-1188741 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 74 |
| Conread position: | 5-319 |
| Cow position: | chr27:2557607-2557916 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-319 |
| Cow position: | chr27:4982758-4982447 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 85 |
| Conread position: | 5-319 |
| Cow position: | chr27:5925648-5925348 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 53 |
| Conread position: | 5-319 |
| Cow position: | chr27:8972830-8972519 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-319 |
| Cow position: | chr27:11481317-11481006 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-319 |
| Cow position: | chr27:15633957-15634267 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 64 |
| Conread position: | 5-319 |
| Cow position: | chr27:25800825-25801130 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 74 |
| Conread position: | 5-319 |
| Cow position: | chr27:26330318-26330008 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr27:26785203-26784897 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 86 |
| Conread position: | 5-319 |
| Cow position: | chr27:27291779-27291464 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 85 |
| Conread position: | 8-280 |
| Cow position: | chr27:15870637-15870897 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 161, 26 |
| Conread position: | 9-209 |
| Cow position: | chr27:10306500-10306304 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 56, 80 |
| Conread position: | 18-159 |
| Cow position: | chr27:24205761-24205897 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 18-316 |
| Cow position: | chr27:25799631-25799334 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 47 |
| Conread position: | 20-304 |
| Cow position: | chr27:11434541-11434265 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 28 |
| Conread position: | 20-307 |
| Cow position: | chr27:27930571-27930294 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 43 |
| Conread position: | 31-295 |
| Cow position: | chr27:29467288-29467031 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 137, 12 |
| Conread position: | 31-315 |
| Cow position: | chr27:5990685-5990965 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 93-319 |
| Cow position: | chr27:27666318-27666082 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 133 |
| Conread position: | 102-319 |
| Cow position: | chr27:24260489-24260704 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 61, 32 |
Show alignments to all cow chromosomes.