Cow genome map
Conread name: | unkn-54-2 |
Conread position: | 1-167 |
Cow position: | chr3:76136639-76136478 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 135 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 26, 8 |
Conread position: | 1-277 |
Cow position: | chr3:19794774-19795044 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 8 |
Conread position: | 4-319 |
Cow position: | chr3:12668017-12667710 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 62 |
Conread position: | 4-319 |
Cow position: | chr3:23204360-23204668 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 86 |
Conread position: | 4-319 |
Cow position: | chr3:78024118-78024424 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 86 |
Conread position: | 5-210 |
Cow position: | chr3:35056293-35056097 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 161 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 5-223 |
Cow position: | chr3:53519120-53518905 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 170 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-261 |
Cow position: | chr3:59864796-59864547 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 85 |
Conread position: | 5-272 |
Cow position: | chr3:49907716-49907980 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 86 |
Conread position: | 5-280 |
Cow position: | chr3:75997572-75997840 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 86 |
Conread position: | 5-293 |
Cow position: | chr3:24572850-24573135 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 86 |
Conread position: | 5-307 |
Cow position: | chr3:49416530-49416830 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-309 |
Cow position: | chr3:76000646-76000945 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 75 |
Conread position: | 5-314 |
Cow position: | chr3:13723395-13723701 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 86 |
Conread position: | 5-314 |
Cow position: | chr3:50204881-50204576 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 86 |
Conread position: | 5-315 |
Cow position: | chr3:40826713-40826408 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-318 |
Cow position: | chr3:35619869-35619564 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 84 |
Conread position: | 5-319 |
Cow position: | chr3:2791068-2790757 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 86 |
Conread position: | 5-319 |
Cow position: | chr3:10243976-10243667 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr3:11384629-11384323 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 81 |
Conread position: | 5-319 |
Cow position: | chr3:12750214-12749906 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 9 |
Conread position: | 5-319 |
Cow position: | chr3:13275961-13276276 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 89 |
Conread position: | 5-319 |
Cow position: | chr3:14864199-14863890 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 86 |
Conread position: | 5-319 |
Cow position: | chr3:19753418-19753721 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr3:20999755-21000083 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 86 |
Conread position: | 5-319 |
Cow position: | chr3:24442786-24443089 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr3:24638722-24638417 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 234 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 166, 24 |
Conread position: | 5-319 |
Cow position: | chr3:30321573-30321263 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr3:31120820-31121131 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 86 |
Conread position: | 5-319 |
Cow position: | chr3:31422805-31423121 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 93 |
Conread position: | 5-319 |
Cow position: | chr3:36874744-36875055 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr3:38869883-38869579 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr3:42846661-42846354 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr3:43189953-43190264 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr3:47272562-47272874 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr3:48603569-48603257 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr3:49134220-49134531 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr3:56645014-56645325 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 87 |
Conread position: | 5-319 |
Cow position: | chr3:57481429-57481731 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 29 |
Conread position: | 5-319 |
Cow position: | chr3:60184854-60185177 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 88 |
Conread position: | 5-319 |
Cow position: | chr3:61677851-61677544 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 5-319 |
Cow position: | chr3:64376394-64376704 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 87 |
Conread position: | 5-319 |
Cow position: | chr3:69930520-69930828 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 38 |
Conread position: | 5-319 |
Cow position: | chr3:72633389-72633079 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 25 |
Conread position: | 5-319 |
Cow position: | chr3:73450997-73451308 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chr3:75038525-75038836 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 86 |
Conread position: | 5-319 |
Cow position: | chr3:81101395-81101084 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-325 |
Cow position: | chr3:49605125-49605441 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 86 |
Conread position: | 8-258 |
Cow position: | chr3:13117748-13117986 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 189 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 218, 81 |
Conread position: | 8-315 |
Cow position: | chr3:49732483-49732785 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 49 |
Conread position: | 8-319 |
Cow position: | chr3:6864972-6864666 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 81 |
Conread position: | 8-319 |
Cow position: | chr3:72669246-72669556 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 82 |
Conread position: | 9-185 |
Cow position: | chr3:14724431-14724260 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 138 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 160, 48 |
Conread position: | 9-190 |
Cow position: | chr3:24432694-24432517 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 145 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 160, 81 |
Conread position: | 9-307 |
Cow position: | chr3:7245793-7246086 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 82 |
Conread position: | 9-319 |
Cow position: | chr3:49541895-49542195 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 81 |
Conread position: | 15-314 |
Cow position: | chr3:63000075-63000347 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 216 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 154, 57 |
Conread position: | 15-319 |
Cow position: | chr3:57555076-57554783 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 227 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 44, 21 |
Conread position: | 16-319 |
Cow position: | chr3:39327851-39327554 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 75 |
Conread position: | 18-243 |
Cow position: | chr3:23217031-23217242 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 179 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 151, 12 |
Conread position: | 18-314 |
Cow position: | chr3:14680391-14680098 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 74 |
Conread position: | 18-315 |
Cow position: | chr3:24585927-24586220 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 73 |
Conread position: | 18-319 |
Cow position: | chr3:27454633-27454927 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 93 |
Conread position: | 18-319 |
Cow position: | chr3:34557074-34557364 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 48 |
Conread position: | 18-319 |
Cow position: | chr3:49387952-49387658 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 73 |
Conread position: | 18-319 |
Cow position: | chr3:56160522-56160811 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 73 |
Conread position: | 18-319 |
Cow position: | chr3:76187842-76187538 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 72 |
Conread position: | 20-304 |
Cow position: | chr3:6854325-6854606 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 72 |
Conread position: | 20-319 |
Cow position: | chr3:2904151-2904435 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 65 |
Conread position: | 20-319 |
Cow position: | chr3:25056988-25056695 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 71 |
Conread position: | 20-319 |
Cow position: | chr3:58950763-58950467 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 69 |
Conread position: | 20-319 |
Cow position: | chr3:66829639-66829933 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 11 |
Conread position: | 22-319 |
Cow position: | chr3:49463260-49463547 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 69 |
Conread position: | 24-242 |
Cow position: | chr3:34464665-34464450 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 168 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 142, 67 |
Conread position: | 26-201 |
Cow position: | chr3:37600030-37599861 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 140 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 30-315 |
Cow position: | chr3:58034352-58034627 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 33 |
Conread position: | 30-319 |
Cow position: | chr3:34116080-34116364 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 61 |
Conread position: | 32-319 |
Cow position: | chr3:21005101-21004821 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 59 |
Conread position: | 47-319 |
Cow position: | chr3:65989195-65988927 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 43 |
Conread position: | 92-319 |
Cow position: | chr3:13115202-13115431 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 96-305 |
Cow position: | chr3:52664626-52664422 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 152 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 19, 23 |
Conread position: | 96-307 |
Cow position: | chr3:61277797-61277580 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 164 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 114, 70 |
Conread position: | 96-319 |
Cow position: | chr3:56336728-56336952 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 121 |
Conread position: | 96-319 |
Cow position: | chr3:66623442-66623218 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 59 |
Conread position: | 100-241 |
Cow position: | chr3:45568458-45568314 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 117 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 102-307 |
Cow position: | chr3:40004261-40004461 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 162 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 67, 72 |
Conread position: | 110-319 |
Cow position: | chr3:5445700-5445906 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 160 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 116, 59 |
Show alignments to all cow chromosomes.