Cow genome map
| Conread name: | unkn-54-2 |
| Conread position: | 5-180 |
| Cow position: | chr4:11918830-11919000 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 139, 85 |
| Conread position: | 5-250 |
| Cow position: | chr4:16641940-16641698 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-255 |
| Cow position: | chr4:14539187-14539423 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 162, 67 |
| Conread position: | 5-258 |
| Cow position: | chr4:61449635-61449385 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-303 |
| Cow position: | chr4:4379495-4379211 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 85 |
| Conread position: | 5-307 |
| Cow position: | chr4:2263581-2263887 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 5-313 |
| Cow position: | chr4:44593280-44593575 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 86 |
| Conread position: | 5-314 |
| Cow position: | chr4:2349597-2349897 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-314 |
| Cow position: | chr4:9041068-9040762 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 86 |
| Conread position: | 5-314 |
| Cow position: | chr4:21297658-21297965 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 87 |
| Conread position: | 5-314 |
| Cow position: | chr4:27882014-27881708 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 86 |
| Conread position: | 5-315 |
| Cow position: | chr4:43316527-43316834 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 84 |
| Conread position: | 5-319 |
| Cow position: | chr4:359004-358696 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 88 |
| Conread position: | 5-319 |
| Cow position: | chr4:1047142-1047453 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr4:3449924-3449607 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr4:3961774-3962077 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr4:6487246-6487556 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr4:10135080-10135391 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr4:18813088-18813399 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr4:27177948-27177639 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr4:27287985-27288294 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 78 |
| Conread position: | 5-319 |
| Cow position: | chr4:29530335-29530646 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr4:33496681-33496373 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 76 |
| Conread position: | 5-319 |
| Cow position: | chr4:36899499-36899188 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 86 |
| Conread position: | 5-319 |
| Cow position: | chr4:43884215-43883904 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr4:46711482-46711795 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 87 |
| Conread position: | 5-319 |
| Cow position: | chr4:54931490-54931795 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 86 |
| Conread position: | 5-319 |
| Cow position: | chr4:55670366-55670060 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 86 |
| Conread position: | 5-319 |
| Cow position: | chr4:57987865-57987555 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 31 |
| Conread position: | 5-319 |
| Cow position: | chr4:61242401-61242094 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr4:64874905-64875214 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-320 |
| Cow position: | chr4:12238112-12238418 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-321 |
| Cow position: | chr4:54758133-54758431 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 8-304 |
| Cow position: | chr4:54973169-54972876 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 84 |
| Conread position: | 8-315 |
| Cow position: | chr4:16363319-16363015 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 82 |
| Conread position: | 8-319 |
| Cow position: | chr4:6034908-6035216 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 75 |
| Conread position: | 8-319 |
| Cow position: | chr4:23304222-23304530 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 82 |
| Conread position: | 8-319 |
| Cow position: | chr4:34712936-34712628 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 82 |
| Conread position: | 8-319 |
| Cow position: | chr4:36026152-36026459 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 82 |
| Conread position: | 9-319 |
| Cow position: | chr4:23525697-23525393 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 74 |
| Conread position: | 10-319 |
| Cow position: | chr4:26874791-26875096 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 80 |
| Conread position: | 10-319 |
| Cow position: | chr4:33069723-33070030 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 20 |
| Conread position: | 11-319 |
| Cow position: | chr4:25596369-25596674 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 79 |
| Conread position: | 15-319 |
| Cow position: | chr4:18096500-18096801 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 76 |
| Conread position: | 18-307 |
| Cow position: | chr4:37786410-37786125 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 71 |
| Conread position: | 18-319 |
| Cow position: | chr4:15463321-15463615 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 73 |
| Conread position: | 18-319 |
| Cow position: | chr4:17473190-17472896 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 71 |
| Conread position: | 18-319 |
| Cow position: | chr4:26745626-26745332 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 55 |
| Conread position: | 18-321 |
| Cow position: | chr4:19237176-19236878 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 73 |
| Conread position: | 20-319 |
| Cow position: | chr4:8673834-8673546 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 222 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 148, 15 |
| Conread position: | 20-319 |
| Cow position: | chr4:10822760-10823057 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 20-319 |
| Cow position: | chr4:17833739-17834036 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 149, 69 |
| Conread position: | 21-315 |
| Cow position: | chr4:12605773-12606053 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 27 |
| Conread position: | 23-201 |
| Cow position: | chr4:11026111-11026285 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 146, 64 |
| Conread position: | 23-319 |
| Cow position: | chr4:19264774-19264492 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 48 |
| Conread position: | 24-233 |
| Cow position: | chr4:34166929-34167135 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 165 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 26-246 |
| Cow position: | chr4:14142409-14142191 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 143, 65 |
| Conread position: | 26-319 |
| Cow position: | chr4:15873533-15873823 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 65 |
| Conread position: | 31-319 |
| Cow position: | chr4:17919864-17920143 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 27 |
| Conread position: | 32-214 |
| Cow position: | chr4:8935981-8935802 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 123, 59 |
| Conread position: | 38-193 |
| Cow position: | chr4:43896413-43896568 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 93-319 |
| Cow position: | chr4:63639081-63639310 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 96-267 |
| Cow position: | chr4:37731709-37731877 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 128, 73 |
| Conread position: | 102-319 |
| Cow position: | chr4:14919087-14918868 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.