Cow genome map
| Conread name: | unkn-54-2 |
| Conread position: | 3-319 |
| Cow position: | chr7:18256483-18256796 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 87 |
| Conread position: | 4-258 |
| Cow position: | chr7:51675385-51675139 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 4-319 |
| Cow position: | chr7:21990096-21989776 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 86 |
| Conread position: | 4-319 |
| Cow position: | chr7:40318153-40317842 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 86 |
| Conread position: | 5-225 |
| Cow position: | chr7:37519861-37520077 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-242 |
| Cow position: | chr7:19799010-19799245 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-245 |
| Cow position: | chr7:49070180-49070420 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 162, 86 |
| Conread position: | 5-246 |
| Cow position: | chr7:6433059-6433286 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 163, 37 |
| Conread position: | 5-250 |
| Cow position: | chr7:14135362-14135603 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-250 |
| Cow position: | chr7:44745398-44745640 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-278 |
| Cow position: | chr7:18871554-18871825 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 5-279 |
| Cow position: | chr7:62952778-62952513 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 43 |
| Conread position: | 5-306 |
| Cow position: | chr7:44621955-44622253 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 86 |
| Conread position: | 5-307 |
| Cow position: | chr7:35428328-35428623 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 86 |
| Conread position: | 5-314 |
| Cow position: | chr7:845374-845068 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 86 |
| Conread position: | 5-314 |
| Cow position: | chr7:1441383-1441689 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 86 |
| Conread position: | 5-314 |
| Cow position: | chr7:46187473-46187170 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 58 |
| Conread position: | 5-314 |
| Cow position: | chr7:54186956-54187263 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 25 |
| Conread position: | 5-315 |
| Cow position: | chr7:11420127-11420435 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-315 |
| Cow position: | chr7:19096844-19097151 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 25 |
| Conread position: | 5-315 |
| Cow position: | chr7:49743572-49743269 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 29 |
| Conread position: | 5-315 |
| Cow position: | chr7:61576682-61576981 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr7:442810-443118 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 15 |
| Conread position: | 5-319 |
| Cow position: | chr7:536404-536697 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 66 |
| Conread position: | 5-319 |
| Cow position: | chr7:759405-759717 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr7:3128756-3128446 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 85 |
| Conread position: | 5-319 |
| Cow position: | chr7:3158740-3158434 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 59 |
| Conread position: | 5-319 |
| Cow position: | chr7:5849858-5850168 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 86 |
| Conread position: | 5-319 |
| Cow position: | chr7:8140630-8140939 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr7:10604641-10604955 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 5-319 |
| Cow position: | chr7:13530453-13530764 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr7:19463395-19463706 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr7:21124217-21124528 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr7:21231567-21231873 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 85 |
| Conread position: | 5-319 |
| Cow position: | chr7:23554416-23554123 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 26 |
| Conread position: | 5-319 |
| Cow position: | chr7:30172796-30173098 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 26 |
| Conread position: | 5-319 |
| Cow position: | chr7:48638147-48637859 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 269, 57 |
| Conread position: | 5-319 |
| Cow position: | chr7:49826913-49827218 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 30 |
| Conread position: | 5-319 |
| Cow position: | chr7:54582903-54582596 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 89 |
| Conread position: | 5-319 |
| Cow position: | chr7:55534467-55534778 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-319 |
| Cow position: | chr7:59774762-59774454 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr7:60757761-60758052 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-319 |
| Cow position: | chr7:62991169-62990872 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-319 |
| Cow position: | chr7:64238608-64238918 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 72 |
| Conread position: | 5-319 |
| Cow position: | chr7:66908695-66908385 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-322 |
| Cow position: | chr7:19398746-19399052 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 58 |
| Conread position: | 5-322 |
| Cow position: | chr7:59437218-59436899 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 8-319 |
| Cow position: | chr7:1367245-1367553 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 82 |
| Conread position: | 8-319 |
| Cow position: | chr7:5304536-5304844 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 82 |
| Conread position: | 8-319 |
| Cow position: | chr7:10427971-10428278 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 55 |
| Conread position: | 8-319 |
| Cow position: | chr7:14211976-14212288 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 83 |
| Conread position: | 8-319 |
| Cow position: | chr7:16934753-16934445 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 81 |
| Conread position: | 8-319 |
| Cow position: | chr7:30415240-30414947 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 8-319 |
| Cow position: | chr7:42429058-42428735 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 172 |
| Conread position: | 8-319 |
| Cow position: | chr7:42431081-42430778 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 83 |
| Conread position: | 8-321 |
| Cow position: | chr7:60741492-60741799 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 77 |
| Conread position: | 9-306 |
| Cow position: | chr7:58196717-58197011 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 81 |
| Conread position: | 9-315 |
| Cow position: | chr7:39795315-39795011 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 81 |
| Conread position: | 9-319 |
| Cow position: | chr7:34489355-34489048 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 81 |
| Conread position: | 9-319 |
| Cow position: | chr7:43110322-43110625 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 80 |
| Conread position: | 9-319 |
| Cow position: | chr7:60727005-60727313 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 81 |
| Conread position: | 9-319 |
| Cow position: | chr7:64353414-64353110 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 82 |
| Conread position: | 11-319 |
| Cow position: | chr7:52167235-52166929 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 79 |
| Conread position: | 11-319 |
| Cow position: | chr7:57910812-57910508 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 79 |
| Conread position: | 13-319 |
| Cow position: | chr7:49844833-49845137 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 74 |
| Conread position: | 15-287 |
| Cow position: | chr7:59687430-59687168 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 153, 65 |
| Conread position: | 16-259 |
| Cow position: | chr7:36128207-36127968 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 151, 84 |
| Conread position: | 18-259 |
| Cow position: | chr7:27552490-27552725 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 45 |
| Conread position: | 18-277 |
| Cow position: | chr7:64405749-64405497 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 72 |
| Conread position: | 18-314 |
| Cow position: | chr7:19467058-19467350 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 70 |
| Conread position: | 18-319 |
| Cow position: | chr7:24873857-24874156 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 67 |
| Conread position: | 18-319 |
| Cow position: | chr7:29346508-29346787 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 39 |
| Conread position: | 18-319 |
| Cow position: | chr7:53362757-53363053 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 73 |
| Conread position: | 18-319 |
| Cow position: | chr7:59659935-59659634 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 67 |
| Conread position: | 23-319 |
| Cow position: | chr7:34152376-34152083 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 68 |
| Conread position: | 23-319 |
| Cow position: | chr7:42873573-42873286 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 68 |
| Conread position: | 24-319 |
| Cow position: | chr7:27394564-27394272 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 68 |
| Conread position: | 46-319 |
| Cow position: | chr7:41747319-41747588 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 45 |
| Conread position: | 53-319 |
| Cow position: | chr7:43394619-43394880 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 29 |
| Conread position: | 77-307 |
| Cow position: | chr7:12330748-12330972 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 149, 14 |
| Conread position: | 96-240 |
| Cow position: | chr7:39132057-39132203 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 96-260 |
| Cow position: | chr7:19269110-19269276 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 102-319 |
| Cow position: | chr7:529330-529113 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 103-319 |
| Cow position: | chr7:956033-955823 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 123, 66 |
Show alignments to all cow chromosomes.