Cow genome map
| Conread name: | unkn-54-2 |
| Conread position: | 1-278 |
| Cow position: | chr8:12057207-12056933 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 1-287 |
| Cow position: | chr8:33585376-33585103 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 2-319 |
| Cow position: | chr8:29920316-29920622 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 4-319 |
| Cow position: | chr8:22376551-22376863 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 65 |
| Conread position: | 4-322 |
| Cow position: | chr8:25773004-25773320 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 86 |
| Conread position: | 5-136 |
| Cow position: | chr8:29011838-29011712 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 5-154 |
| Cow position: | chr8:36333012-36333156 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 5-263 |
| Cow position: | chr8:42427956-42428213 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-267 |
| Cow position: | chr8:2823522-2823779 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-280 |
| Cow position: | chr8:24872635-24872897 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 186, 31 |
| Conread position: | 5-291 |
| Cow position: | chr8:11118321-11118597 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 25 |
| Conread position: | 5-293 |
| Cow position: | chr8:44113716-44113431 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-305 |
| Cow position: | chr8:47666925-47667222 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 86 |
| Conread position: | 5-313 |
| Cow position: | chr8:18402684-18402995 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-315 |
| Cow position: | chr8:1115634-1115937 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 60, 80 |
| Conread position: | 5-315 |
| Cow position: | chr8:1998814-1998513 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-315 |
| Cow position: | chr8:8914362-8914055 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-315 |
| Cow position: | chr8:39192273-39192580 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-315 |
| Cow position: | chr8:61197634-61197941 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr8:3333025-3333335 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-319 |
| Cow position: | chr8:4690037-4689726 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr8:9687961-9687652 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 25 |
| Conread position: | 5-319 |
| Cow position: | chr8:11836148-11835856 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 163, 85 |
| Conread position: | 5-319 |
| Cow position: | chr8:12795025-12794722 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-319 |
| Cow position: | chr8:14588235-14588546 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr8:18568265-18568575 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 85 |
| Conread position: | 5-319 |
| Cow position: | chr8:19052921-19052617 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 85 |
| Conread position: | 5-319 |
| Cow position: | chr8:19334225-19333902 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 85 |
| Conread position: | 5-319 |
| Cow position: | chr8:22030751-22030440 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr8:32314991-32315302 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 86 |
| Conread position: | 5-319 |
| Cow position: | chr8:35529316-35529005 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr8:49620075-49619766 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 75 |
| Conread position: | 5-319 |
| Cow position: | chr8:51061505-51061817 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 6 |
| Conread position: | 5-319 |
| Cow position: | chr8:51603249-51603558 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 58 |
| Conread position: | 5-319 |
| Cow position: | chr8:51674784-51674473 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 5-319 |
| Cow position: | chr8:53429027-53428718 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 5-322 |
| Cow position: | chr8:25671928-25671615 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 8-161 |
| Cow position: | chr8:46645287-46645435 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 8-319 |
| Cow position: | chr8:8016438-8016747 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 82 |
| Conread position: | 9-314 |
| Cow position: | chr8:1150660-1150962 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 82 |
| Conread position: | 11-315 |
| Cow position: | chr8:49284442-49284735 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 74 |
| Conread position: | 11-319 |
| Cow position: | chr8:50927473-50927778 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 79 |
| Conread position: | 16-258 |
| Cow position: | chr8:50734531-50734304 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 151, 42 |
| Conread position: | 18-142 |
| Cow position: | chr8:46480703-46480822 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 18-319 |
| Cow position: | chr8:1935933-1935648 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 63 |
| Conread position: | 18-319 |
| Cow position: | chr8:20673033-20673323 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 20-287 |
| Cow position: | chr8:6747940-6748195 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 20-307 |
| Cow position: | chr8:12806377-12806102 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 38 |
| Conread position: | 20-321 |
| Cow position: | chr8:34400162-34399865 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 75 |
| Conread position: | 21-268 |
| Cow position: | chr8:8820853-8820610 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 147, 51 |
| Conread position: | 32-319 |
| Cow position: | chr8:59258391-59258675 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 59 |
| Conread position: | 34-319 |
| Cow position: | chr8:47658722-47659005 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 56 |
| Conread position: | 37-319 |
| Cow position: | chr8:12311282-12311558 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 54 |
| Conread position: | 37-319 |
| Cow position: | chr8:33898315-33898593 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 53 |
| Conread position: | 52-319 |
| Cow position: | chr8:53981198-53980933 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 117, 39 |
| Conread position: | 85-319 |
| Cow position: | chr8:53421280-53421051 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 96-280 |
| Cow position: | chr8:49520933-49520751 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 73, 137 |
| Conread position: | 110-260 |
| Cow position: | chr8:7682718-7682869 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 37, 50 |
Show alignments to all cow chromosomes.