Cow genome map
Conread name: | unkn-54-2 |
Conread position: | 4-193 |
Cow position: | chrX:28156731-28156554 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 141 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 4-301 |
Cow position: | chrX:12289920-12289641 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 219 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 222, 42 |
Conread position: | 4-319 |
Cow position: | chrX:1550164-1549852 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 86 |
Conread position: | 4-319 |
Cow position: | chrX:13406087-13406399 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 86 |
Conread position: | 4-319 |
Cow position: | chrX:24588537-24588847 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 26 |
Conread position: | 4-319 |
Cow position: | chrX:29916146-29916459 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 86 |
Conread position: | 5-167 |
Cow position: | chrX:35240070-35239913 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 127 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 5-185 |
Cow position: | chrX:37134435-37134611 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 136 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-202 |
Cow position: | chrX:21254977-21254784 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 148 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-224 |
Cow position: | chrX:12178877-12178657 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 169 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 45, 85 |
Conread position: | 5-257 |
Cow position: | chrX:32584733-32584981 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-277 |
Cow position: | chrX:29892285-29892013 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 84 |
Conread position: | 5-280 |
Cow position: | chrX:35024258-35023996 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 44 |
Conread position: | 5-294 |
Cow position: | chrX:30060085-30059800 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 86 |
Conread position: | 5-305 |
Cow position: | chrX:5248585-5248292 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 83 |
Conread position: | 5-306 |
Cow position: | chrX:23022511-23022218 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 76 |
Conread position: | 5-313 |
Cow position: | chrX:27498027-27497724 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 86 |
Conread position: | 5-315 |
Cow position: | chrX:22493229-22492925 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 85 |
Conread position: | 5-318 |
Cow position: | chrX:5354105-5354412 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 52 |
Conread position: | 5-319 |
Cow position: | chrX:323112-322803 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chrX:5365396-5365707 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 107 |
Conread position: | 5-319 |
Cow position: | chrX:5375079-5375389 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chrX:6406552-6406243 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 87 |
Conread position: | 5-319 |
Cow position: | chrX:7551603-7551914 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chrX:7572589-7572278 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 80 |
Conread position: | 5-319 |
Cow position: | chrX:16702869-16702558 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chrX:16711154-16710843 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chrX:18193888-18193577 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chrX:18244183-18243880 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 79 |
Conread position: | 5-319 |
Cow position: | chrX:18950538-18950849 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chrX:20953731-20953422 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 86 |
Conread position: | 5-319 |
Cow position: | chrX:21226675-21226369 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chrX:21389776-21389465 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chrX:22819276-22818962 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 87 |
Conread position: | 5-319 |
Cow position: | chrX:22870017-22869706 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 86 |
Conread position: | 5-319 |
Cow position: | chrX:23280222-23279914 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chrX:23341793-23342104 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 85 |
Conread position: | 5-319 |
Cow position: | chrX:23572618-23572931 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 87 |
Conread position: | 5-319 |
Cow position: | chrX:27616010-27615700 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 86 |
Conread position: | 5-319 |
Cow position: | chrX:27977636-27977945 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 91 |
Conread position: | 5-319 |
Cow position: | chrX:28624563-28624867 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 52 |
Conread position: | 5-319 |
Cow position: | chrX:29099615-29099306 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-319 |
Cow position: | chrX:34442244-34442541 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 79 |
Conread position: | 5-319 |
Cow position: | chrX:41156509-41156199 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 85 |
Conread position: | 5-319 |
Cow position: | chrX:41847332-41847642 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 102 |
Conread position: | 5-321 |
Cow position: | chrX:23221845-23222141 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 5-322 |
Cow position: | chrX:23395805-23395491 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 5-322 |
Cow position: | chrX:44193242-44193552 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 67 |
Conread position: | 8-319 |
Cow position: | chrX:9899148-9899449 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 41 |
Conread position: | 8-319 |
Cow position: | chrX:16782475-16782173 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 83 |
Conread position: | 8-319 |
Cow position: | chrX:21415062-21414754 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 81 |
Conread position: | 8-319 |
Cow position: | chrX:21592486-21592180 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 82 |
Conread position: | 8-319 |
Cow position: | chrX:23038790-23039096 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 57 |
Conread position: | 8-319 |
Cow position: | chrX:25451531-25451223 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 64 |
Conread position: | 8-319 |
Cow position: | chrX:26531168-26530860 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 82 |
Conread position: | 9-196 |
Cow position: | chrX:21063667-21063486 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 147 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 160, 81 |
Conread position: | 9-245 |
Cow position: | chrX:27095323-27095098 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 183 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 217, 82 |
Conread position: | 9-257 |
Cow position: | chrX:38150882-38150638 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 80 |
Conread position: | 9-305 |
Cow position: | chrX:12310195-12310484 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 82 |
Conread position: | 9-319 |
Cow position: | chrX:10866675-10866969 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 59 |
Conread position: | 9-319 |
Cow position: | chrX:30228919-30229225 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 81 |
Conread position: | 11-307 |
Cow position: | chrX:38228125-38228416 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 80 |
Conread position: | 11-319 |
Cow position: | chrX:28605903-28606202 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 225 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 157, 32 |
Conread position: | 13-319 |
Cow position: | chrX:15121971-15122273 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 77 |
Conread position: | 17-322 |
Cow position: | chrX:17663730-17664031 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 74 |
Conread position: | 18-307 |
Cow position: | chrX:30164053-30164337 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 73 |
Conread position: | 18-319 |
Cow position: | chrX:4905802-4906100 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 72 |
Conread position: | 18-319 |
Cow position: | chrX:25817642-25817930 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 62 |
Conread position: | 19-307 |
Cow position: | chrX:30136684-30136960 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 213 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 148, 32 |
Conread position: | 21-272 |
Cow position: | chrX:40560358-40560604 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 177 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 109, 69 |
Conread position: | 21-319 |
Cow position: | chrX:21662224-21661902 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 240 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 149, 70 |
Conread position: | 22-209 |
Cow position: | chrX:41879748-41879921 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 143 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 23-319 |
Cow position: | chrX:32145075-32145369 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 67 |
Conread position: | 25-319 |
Cow position: | chrX:12996732-12997023 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 66 |
Conread position: | 25-319 |
Cow position: | chrX:29288176-29287885 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 66 |
Conread position: | 32-306 |
Cow position: | chrX:22579216-22579487 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 59 |
Conread position: | 32-319 |
Cow position: | chrX:9095814-9095530 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 58 |
Conread position: | 35-319 |
Cow position: | chrX:10438739-10439021 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 21 |
Conread position: | 36-319 |
Cow position: | chrX:9227735-9228015 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 55 |
Conread position: | 37-211 |
Cow position: | chrX:44053983-44053812 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 143 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 75, 54 |
Conread position: | 42-307 |
Cow position: | chrX:37815340-37815078 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 50 |
Conread position: | 43-319 |
Cow position: | chrX:16854205-16854478 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 47 |
Conread position: | 55-223 |
Cow position: | chrX:28765960-28766124 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 134 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 114, 36 |
Conread position: | 62-319 |
Cow position: | chrX:37488098-37487838 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 107-319 |
Cow position: | chrX:32129878-32129664 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 165 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.