Cow genome map
Conread name: | unkn-54-33 |
Conread position: | 6-142 |
Cow position: | chr11:38505536-38505399 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 109 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 7-266 |
Cow position: | chr11:4027485-4027224 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 38 |
Conread position: | 12-268 |
Cow position: | chr11:45111699-45111956 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 193 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 9, 221 |
Conread position: | 14-202 |
Cow position: | chr11:11677429-11677622 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 140 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 10, 113 |
Conread position: | 14-234 |
Cow position: | chr11:41170608-41170382 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 14-242 |
Cow position: | chr11:19102401-19102176 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 172 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 7, 142 |
Conread position: | 14-258 |
Cow position: | chr11:31874691-31874442 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 71 |
Conread position: | 14-258 |
Cow position: | chr11:40775916-40775668 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 70 |
Conread position: | 14-258 |
Cow position: | chr11:43514551-43514302 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 113 |
Conread position: | 14-260 |
Cow position: | chr11:38835346-38835097 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 195 |
Conread position: | 14-265 |
Cow position: | chr11:62229275-62229522 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 187 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 141, 6 |
Conread position: | 14-266 |
Cow position: | chr11:23877388-23877646 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 14-266 |
Cow position: | chr11:57627969-57627702 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 14-266 |
Cow position: | chr11:58134472-58134730 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 14-269 |
Cow position: | chr11:10847527-10847789 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 14-269 |
Cow position: | chr11:11988192-11988451 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 205 |
Conread position: | 14-269 |
Cow position: | chr11:12358339-12358078 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 14-269 |
Cow position: | chr11:24393404-24393661 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 189 |
Conread position: | 14-269 |
Cow position: | chr11:29668531-29668270 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 71 |
Conread position: | 14-269 |
Cow position: | chr11:42432230-42432489 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 193 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 7, 27 |
Conread position: | 14-269 |
Cow position: | chr11:44157168-44156907 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 14-269 |
Cow position: | chr11:71329673-71329931 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 195 |
Conread position: | 14-269 |
Cow position: | chr11:76374128-76373877 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 101 |
Conread position: | 16-269 |
Cow position: | chr11:84389715-84389970 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 193 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 136, 128 |
Conread position: | 20-269 |
Cow position: | chr11:52419483-52419735 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 187 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 135, 20 |
Conread position: | 21-258 |
Cow position: | chr11:10090769-10091010 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 81 |
Conread position: | 22-145 |
Cow position: | chr11:20510217-20510338 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 98 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 22-193 |
Cow position: | chr11:47760603-47760427 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 141 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-215 |
Cow position: | chr11:4041002-4040808 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 154 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 38, 105 |
Conread position: | 22-232 |
Cow position: | chr11:4270767-4270553 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-242 |
Cow position: | chr11:9734576-9734349 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 179 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 22-257 |
Cow position: | chr11:33194466-33194228 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 50 |
Conread position: | 22-258 |
Cow position: | chr11:3493098-3493325 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 177 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 22-258 |
Cow position: | chr11:67450585-67450823 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 202 |
Conread position: | 22-265 |
Cow position: | chr11:67153736-67153981 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 183 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 130, 18 |
Conread position: | 22-266 |
Cow position: | chr11:85393717-85393469 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 31 |
Conread position: | 22-269 |
Cow position: | chr11:12093649-12093905 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 195 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 90, 34 |
Conread position: | 22-269 |
Cow position: | chr11:15983712-15983964 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-269 |
Cow position: | chr11:17107599-17107348 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 77 |
Conread position: | 22-269 |
Cow position: | chr11:19064162-19063911 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 22-269 |
Cow position: | chr11:20734155-20733903 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-269 |
Cow position: | chr11:28108237-28108489 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-269 |
Cow position: | chr11:28229670-28229419 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-269 |
Cow position: | chr11:36744094-36743842 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-269 |
Cow position: | chr11:44251887-44252138 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 18 |
Conread position: | 22-269 |
Cow position: | chr11:53431972-53431720 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-269 |
Cow position: | chr11:61400964-61400721 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 151 |
Conread position: | 22-269 |
Cow position: | chr11:63655250-63654998 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-269 |
Cow position: | chr11:64046085-64046337 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-269 |
Cow position: | chr11:64081996-64081744 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-269 |
Cow position: | chr11:67846484-67846232 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 22-269 |
Cow position: | chr11:73477395-73477647 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-272 |
Cow position: | chr11:30206018-30206256 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 173 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 64, 73 |
Conread position: | 22-275 |
Cow position: | chr11:10217234-10216987 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 180 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 37, 32 |
Conread position: | 22-278 |
Cow position: | chr11:5343130-5342870 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 254 |
Conread position: | 22-278 |
Cow position: | chr11:53287078-53286818 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 254 |
Conread position: | 23-269 |
Cow position: | chr11:22934886-22935135 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 60 |
Conread position: | 23-269 |
Cow position: | chr11:26124833-26124588 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 103 |
Conread position: | 24-239 |
Cow position: | chr11:8245404-8245624 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 170 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 24-257 |
Cow position: | chr11:9157064-9156825 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 179 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 90, 94 |
Conread position: | 24-258 |
Cow position: | chr11:66727469-66727705 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 169 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 131, 93 |
Conread position: | 24-269 |
Cow position: | chr11:28054520-28054270 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 25-258 |
Cow position: | chr11:9606486-9606249 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 30 |
Conread position: | 25-269 |
Cow position: | chr11:52885953-52885729 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 173 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 26-153 |
Cow position: | chr11:33978111-33977984 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 97 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 26-265 |
Cow position: | chr11:46246469-46246214 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 189 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 28-265 |
Cow position: | chr11:7116307-7116553 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 185 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 30, 190 |
Conread position: | 28-269 |
Cow position: | chr11:31926267-31926511 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 185 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 10, 33 |
Conread position: | 29-239 |
Cow position: | chr11:10868590-10868794 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 155 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 14, 79 |
Conread position: | 31-266 |
Cow position: | chr11:28049101-28048871 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 173 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 120, 14 |
Conread position: | 32-266 |
Cow position: | chr11:44492174-44491936 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 174 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 18, 94 |
Conread position: | 35-269 |
Cow position: | chr11:16986223-16985986 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 160 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 120, 25 |
Conread position: | 38-262 |
Cow position: | chr11:13066555-13066327 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 156 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 113, 219 |
Conread position: | 39-212 |
Cow position: | chr11:4057121-4057299 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 135 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 42-263 |
Cow position: | chr11:39802972-39803193 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 158 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 110, 52 |
Conread position: | 42-269 |
Cow position: | chr11:18072902-18072684 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 161 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 8, 18 |
Conread position: | 49-257 |
Cow position: | chr11:10051837-10052049 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 150 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 106, 126 |
Conread position: | 62-269 |
Cow position: | chr11:17546294-17546506 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 160 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 71-269 |
Cow position: | chr11:9216934-9216739 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 148 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 11, 128 |
Conread position: | 98-266 |
Cow position: | chr11:30124311-30124142 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 126 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 57, 22 |
Conread position: | 151-269 |
Cow position: | chr11:37476777-37476659 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 96 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.