Cow genome map

Conread name: unkn-54-33

Conread position: 3-269
Cow position: chr14:33237055-33237323 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 91

Conread position: 6-269
Cow position: chr14:43557989-43558259 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 11-258
Cow position: chr14:48825317-48825564 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 190

Conread position: 11-266
Cow position: chr14:17685420-17685680 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 236

Conread position: 12-197
Cow position: chr14:35386788-35386599 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 9, 92

Conread position: 14-137
Cow position: chr14:17760873-17760749 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 14-194
Cow position: chr14:46474864-46475037 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 113

Conread position: 14-258
Cow position: chr14:13621112-13620876 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 7, 30

Conread position: 14-258
Cow position: chr14:40340793-40341042 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 9, 94

Conread position: 14-258
Cow position: chr14:44686070-44686320 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 14-258
Cow position: chr14:45161124-45161374 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 14-266
Cow position: chr14:5529089-5529346 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 26

Conread position: 14-266
Cow position: chr14:45302929-45302694 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 6, 0

Conread position: 14-268
Cow position: chr14:13303048-13303310 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 221

Conread position: 14-268
Cow position: chr14:22031395-22031128 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 14-268
Cow position: chr14:38531712-38531457 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 199
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 7, 79

Conread position: 14-268
Cow position: chr14:45189744-45189490 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 66

Conread position: 14-269
Cow position: chr14:5511849-5512107 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 168

Conread position: 14-269
Cow position: chr14:11154139-11153881 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 191

Conread position: 14-269
Cow position: chr14:12743045-12742784 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 14-269
Cow position: chr14:13273473-13273726 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 138, 6

Conread position: 14-269
Cow position: chr14:13778981-13779240 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 66

Conread position: 14-269
Cow position: chr14:16919663-16919433 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 7, 97

Conread position: 14-269
Cow position: chr14:17001035-17000778 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 81

Conread position: 14-269
Cow position: chr14:19328243-19327987 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 187

Conread position: 14-269
Cow position: chr14:37223928-37224187 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 60

Conread position: 14-269
Cow position: chr14:44287224-44286962 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 14-269
Cow position: chr14:45081070-45081331 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 14-269
Cow position: chr14:48254276-48254018 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 195

Conread position: 14-269
Cow position: chr14:50110594-50110855 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 16-266
Cow position: chr14:44226424-44226678 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 7, 25

Conread position: 22-153
Cow position: chr14:33342167-33342299 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 22-255
Cow position: chr14:29777468-29777231 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 190

Conread position: 22-258
Cow position: chr14:12610488-12610718 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 27

Conread position: 22-258
Cow position: chr14:13864052-13863811 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-265
Cow position: chr14:17491427-17491179 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 32

Conread position: 22-269
Cow position: chr14:2284368-2284619 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 44

Conread position: 22-269
Cow position: chr14:9045595-9045848 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 22-269
Cow position: chr14:23257388-23257640 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-269
Cow position: chr14:33393749-33393501 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 67

Conread position: 22-269
Cow position: chr14:45672016-45671766 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 68

Conread position: 22-269
Cow position: chr14:50138627-50138874 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 141

Conread position: 22-270
Cow position: chr14:45029095-45028849 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 130, 156

Conread position: 22-278
Cow position: chr14:750599-750871 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 78, 24

Conread position: 23-153
Cow position: chr14:45834181-45834311 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 23-258
Cow position: chr14:30584923-30584683 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 129, 0

Conread position: 23-258
Cow position: chr14:45711955-45711716 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 32, 179

Conread position: 23-263
Cow position: chr14:20782493-20782737 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 157

Conread position: 23-266
Cow position: chr14:44551924-44552172 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 28, 190

Conread position: 25-183
Cow position: chr14:29047871-29047708 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 127, 0

Conread position: 25-265
Cow position: chr14:30596345-30596099 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 120, 101

Conread position: 27-269
Cow position: chr14:45206351-45206604 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 99

Conread position: 28-266
Cow position: chr14:44581404-44581636 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 158
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 28-269
Cow position: chr14:7472401-7472647 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 29-269
Cow position: chr14:40738552-40738791 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 11

Conread position: 30-258
Cow position: chr14:44377844-44378075 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 122, 160

Conread position: 30-266
Cow position: chr14:16273260-16273018 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 34-269
Cow position: chr14:32446841-32447077 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 118, 12

Conread position: 41-266
Cow position: chr14:38147067-38147303 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 73, 59

Conread position: 45-266
Cow position: chr14:15276174-15275950 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 110, 60

Conread position: 65-269
Cow position: chr14:23901362-23901570 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 90, 10

Conread position: 75-265
Cow position: chr14:33401775-33401968 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 76, 150

Conread position: 81-232
Cow position: chr14:33676872-33677029 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 91-269
Cow position: chr14:4862939-4862756 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 92-269
Cow position: chr14:27977458-27977640 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 0

Conread position: 107-269
Cow position: chr14:190081-190248 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 126-265
Cow position: chr14:35917470-35917326 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 129-269
Cow position: chr14:12899241-12899383 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 84

Conread position: 151-265
Cow position: chr14:16343985-16343872 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 176-269
Cow position: chr14:44288960-44288866 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Show alignments to all cow chromosomes.