Cow genome map

Conread name: unkn-54-33

Conread position: 3-265
Cow position: chr15:17292455-17292727 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 133

Conread position: 11-258
Cow position: chr15:4651388-4651640 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 60

Conread position: 12-263
Cow position: chr15:2076674-2076927 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 13-266
Cow position: chr15:2413537-2413282 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 118, 7

Conread position: 14-153
Cow position: chr15:7234327-7234465 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 14-193
Cow position: chr15:9912664-9912844 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 36

Conread position: 14-200
Cow position: chr15:51216616-51216805 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 7, 0

Conread position: 14-218
Cow position: chr15:2591740-2591531 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 122

Conread position: 14-225
Cow position: chr15:24794377-24794592 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 7, 98

Conread position: 14-232
Cow position: chr15:690801-691020 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 138, 6

Conread position: 14-240
Cow position: chr15:4765233-4765465 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 7, 0

Conread position: 14-242
Cow position: chr15:6553792-6553557 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 14-249
Cow position: chr15:3261306-3261066 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 173

Conread position: 14-255
Cow position: chr15:21449727-21449958 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 51

Conread position: 14-257
Cow position: chr15:8099516-8099752 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 32

Conread position: 14-261
Cow position: chr15:44828822-44829075 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 111

Conread position: 14-263
Cow position: chr15:21665718-21665468 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 187

Conread position: 14-264
Cow position: chr15:51714985-51715241 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 213

Conread position: 14-265
Cow position: chr15:1237712-1237961 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 117, 11

Conread position: 14-265
Cow position: chr15:28490119-28489869 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 6

Conread position: 14-266
Cow position: chr15:4812630-4812880 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 7, 114

Conread position: 14-266
Cow position: chr15:4922178-4922436 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 14-266
Cow position: chr15:7934354-7934609 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 9, 32

Conread position: 14-266
Cow position: chr15:12421138-12420880 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 164

Conread position: 14-266
Cow position: chr15:19738025-19737770 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 195

Conread position: 14-266
Cow position: chr15:35753569-35753307 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 113

Conread position: 14-268
Cow position: chr15:17080180-17079921 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 179

Conread position: 14-269
Cow position: chr15:369133-368888 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 90

Conread position: 14-269
Cow position: chr15:524833-524574 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 190

Conread position: 14-269
Cow position: chr15:5980384-5980647 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 14-269
Cow position: chr15:6078784-6079036 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 7, 48

Conread position: 14-269
Cow position: chr15:7837272-7837532 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 182

Conread position: 14-269
Cow position: chr15:9429969-9430224 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 12, 6

Conread position: 14-269
Cow position: chr15:15347091-15346831 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 27

Conread position: 14-269
Cow position: chr15:18332800-18332544 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 26

Conread position: 14-269
Cow position: chr15:18576742-18576999 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 48

Conread position: 14-269
Cow position: chr15:19817995-19818249 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 142, 6

Conread position: 14-269
Cow position: chr15:24295122-24295383 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 14-269
Cow position: chr15:31358914-31359170 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 187

Conread position: 14-269
Cow position: chr15:32494359-32494101 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 195

Conread position: 14-269
Cow position: chr15:32673521-32673268 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 32

Conread position: 14-269
Cow position: chr15:44069948-44070208 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 202

Conread position: 20-269
Cow position: chr15:38980699-38980953 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 21-269
Cow position: chr15:3009821-3009569 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 25

Conread position: 22-153
Cow position: chr15:29009870-29010001 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 22-153
Cow position: chr15:36077278-36077409 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 22-183
Cow position: chr15:42320390-42320225 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 130, 68

Conread position: 22-255
Cow position: chr15:7544918-7545152 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 130, 57

Conread position: 22-259
Cow position: chr15:1764126-1764370 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 94

Conread position: 22-260
Cow position: chr15:3842393-3842148 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 186

Conread position: 22-265
Cow position: chr15:444638-444884 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 109

Conread position: 22-266
Cow position: chr15:315823-315575 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 97

Conread position: 22-266
Cow position: chr15:4385304-4385549 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 135, 91

Conread position: 22-266
Cow position: chr15:6155912-6155663 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-266
Cow position: chr15:32711133-32711373 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 155

Conread position: 22-266
Cow position: chr15:37392527-37392775 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 86

Conread position: 22-269
Cow position: chr15:789541-789289 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-269
Cow position: chr15:1772529-1772781 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-269
Cow position: chr15:1834431-1834187 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 59

Conread position: 22-269
Cow position: chr15:1882475-1882223 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-269
Cow position: chr15:2647624-2647371 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 186

Conread position: 22-269
Cow position: chr15:3888908-3889162 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 133, 85

Conread position: 22-269
Cow position: chr15:4142787-4142535 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-269
Cow position: chr15:4196493-4196745 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 22-269
Cow position: chr15:6471888-6471636 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 22-269
Cow position: chr15:18267956-18267704 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-269
Cow position: chr15:36970955-36971200 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 42

Conread position: 22-269
Cow position: chr15:42936745-42936997 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 22-269
Cow position: chr15:50123911-50123659 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-269
Cow position: chr15:50147109-50147350 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 133, 58

Conread position: 23-242
Cow position: chr15:8750460-8750683 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 118, 0

Conread position: 23-256
Cow position: chr15:7894195-7893963 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 17, 28

Conread position: 23-258
Cow position: chr15:1519118-1518878 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 23-258
Cow position: chr15:14582318-14582083 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 177

Conread position: 23-261
Cow position: chr15:35647629-35647387 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 195

Conread position: 23-262
Cow position: chr15:35735611-35735852 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 23-269
Cow position: chr15:10888649-10888901 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 23-269
Cow position: chr15:32693611-32693854 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 157, 132

Conread position: 25-247
Cow position: chr15:7260669-7260886 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 126, 108

Conread position: 25-269
Cow position: chr15:4671470-4671718 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 235

Conread position: 25-277
Cow position: chr15:56527-56777 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 127, 89

Conread position: 27-247
Cow position: chr15:32720701-32720474 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 100

Conread position: 27-265
Cow position: chr15:7549442-7549682 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 125, 11

Conread position: 27-269
Cow position: chr15:4961683-4961929 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 129, 71

Conread position: 29-266
Cow position: chr15:16508037-16508272 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 119, 49

Conread position: 29-269
Cow position: chr15:53137178-53136937 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 49

Conread position: 40-265
Cow position: chr15:11625662-11625884 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 63

Conread position: 42-269
Cow position: chr15:45115001-45114784 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 146, 84

Conread position: 46-265
Cow position: chr15:40105920-40106143 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 109, 127

Conread position: 63-268
Cow position: chr15:32203736-32203940 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 92, 7

Conread position: 68-269
Cow position: chr15:4678383-4678588 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 84, 136

Conread position: 70-266
Cow position: chr15:24717175-24717369 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 42

Conread position: 87-257
Cow position: chr15:4685697-4685873 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 90-269
Cow position: chr15:1782322-1782506 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 118-257
Cow position: chr15:31862426-31862281 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 161-269
Cow position: chr15:11597832-11597724 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.