Cow genome map
| Conread name: | unkn-54-33 |
| Conread position: | 11-269 |
| Cow position: | chr17:15850653-15850917 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 12-182 |
| Cow position: | chr17:19269111-19268935 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 12-263 |
| Cow position: | chr17:1880346-1880609 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 14-258 |
| Cow position: | chr17:151620-151369 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 14-266 |
| Cow position: | chr17:3642578-3642318 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 170 |
| Conread position: | 14-266 |
| Cow position: | chr17:40805076-40805326 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 160 |
| Conread position: | 14-268 |
| Cow position: | chr17:6260101-6260363 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-268 |
| Cow position: | chr17:24029741-24029491 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 73 |
| Conread position: | 14-269 |
| Cow position: | chr17:5226875-5227135 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr17:6119961-6120224 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 116 |
| Conread position: | 14-269 |
| Cow position: | chr17:15324080-15324341 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr17:19019830-19020087 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 14-270 |
| Cow position: | chr17:2579873-2580136 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-273 |
| Cow position: | chr17:11087466-11087205 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 88 |
| Conread position: | 21-270 |
| Cow position: | chr17:14894420-14894674 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 22-174 |
| Cow position: | chr17:43952302-43952145 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-244 |
| Cow position: | chr17:22132497-22132724 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 102, 109 |
| Conread position: | 22-250 |
| Cow position: | chr17:34156389-34156622 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-255 |
| Cow position: | chr17:20087480-20087243 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 186 |
| Conread position: | 22-258 |
| Cow position: | chr17:15156704-15156464 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 95 |
| Conread position: | 22-258 |
| Cow position: | chr17:20183691-20183925 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 132, 187 |
| Conread position: | 22-258 |
| Cow position: | chr17:31767778-31767537 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-261 |
| Cow position: | chr17:2174149-2174378 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 133, 31 |
| Conread position: | 22-265 |
| Cow position: | chr17:24782428-24782668 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 127, 59 |
| Conread position: | 22-266 |
| Cow position: | chr17:228047-227798 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 22-266 |
| Cow position: | chr17:20665465-20665215 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 22-268 |
| Cow position: | chr17:12669809-12669568 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 64, 48 |
| Conread position: | 22-269 |
| Cow position: | chr17:1382553-1382306 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 133 |
| Conread position: | 22-269 |
| Cow position: | chr17:2262363-2262616 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 22-269 |
| Cow position: | chr17:8209367-8209620 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 22-269 |
| Cow position: | chr17:11376523-11376271 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chr17:14216765-14216520 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 78 |
| Conread position: | 22-269 |
| Cow position: | chr17:15143106-15142855 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 223 |
| Conread position: | 22-269 |
| Cow position: | chr17:15436052-15436304 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chr17:16857257-16857006 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 27 |
| Conread position: | 22-269 |
| Cow position: | chr17:23324193-23323941 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 102 |
| Conread position: | 23-269 |
| Cow position: | chr17:250428-250680 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 23-270 |
| Cow position: | chr17:14040767-14040517 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 101 |
| Conread position: | 25-266 |
| Cow position: | chr17:6068826-6069066 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 5 |
| Conread position: | 25-269 |
| Cow position: | chr17:1657578-1657336 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 122, 106 |
| Conread position: | 26-258 |
| Cow position: | chr17:4060370-4060607 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 27-255 |
| Cow position: | chr17:18103414-18103189 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 127, 46 |
| Conread position: | 29-224 |
| Cow position: | chr17:42265194-42265394 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 36-269 |
| Cow position: | chr17:18300118-18299881 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 119, 30 |
| Conread position: | 55-265 |
| Cow position: | chr17:9081146-9080931 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 88-269 |
| Cow position: | chr17:2247741-2247557 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 92-269 |
| Cow position: | chr17:43988831-43989013 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 145-266 |
| Cow position: | chr17:20402816-20402936 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 151-266 |
| Cow position: | chr17:11783242-11783357 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.