Cow genome map

Conread name: unkn-54-33

Conread position: 6-273
Cow position: chr2:2381005-2381277 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 41

Conread position: 11-263
Cow position: chr2:10186324-10186068 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 85

Conread position: 11-269
Cow position: chr2:14823025-14823274 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 12, 47

Conread position: 11-269
Cow position: chr2:19011250-19011513 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 228

Conread position: 11-269
Cow position: chr2:42671083-42670822 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 198

Conread position: 14-137
Cow position: chr2:7902927-7903051 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 14-145
Cow position: chr2:69584713-69584582 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 32

Conread position: 14-153
Cow position: chr2:52062580-52062718 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 45

Conread position: 14-171
Cow position: chr2:50983316-50983154 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 7, 41

Conread position: 14-173
Cow position: chr2:49604846-49605003 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 142

Conread position: 14-181
Cow position: chr2:81256717-81256893 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 14-242
Cow position: chr2:5813472-5813242 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 15

Conread position: 14-242
Cow position: chr2:36053084-36052858 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 7, 42

Conread position: 14-255
Cow position: chr2:5485064-5484825 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 10, 166

Conread position: 14-257
Cow position: chr2:39622533-39622769 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 10, 66

Conread position: 14-258
Cow position: chr2:3835062-3834802 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 14-258
Cow position: chr2:16290248-16290494 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 191

Conread position: 14-258
Cow position: chr2:28642905-28642663 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 7, 40

Conread position: 14-258
Cow position: chr2:44935010-44934760 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 37

Conread position: 14-261
Cow position: chr2:41172577-41172827 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 211

Conread position: 14-263
Cow position: chr2:198879-198624 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 7, 214

Conread position: 14-265
Cow position: chr2:10732858-10732610 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 7, 158

Conread position: 14-266
Cow position: chr2:10611720-10611467 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 45

Conread position: 14-266
Cow position: chr2:31297704-31297961 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 14-266
Cow position: chr2:44991384-44991127 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 75

Conread position: 14-268
Cow position: chr2:24146772-24147032 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 32

Conread position: 14-268
Cow position: chr2:65938539-65938282 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 195

Conread position: 14-269
Cow position: chr2:282780-282519 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 14-269
Cow position: chr2:5870446-5870195 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 7, 152

Conread position: 14-269
Cow position: chr2:8118449-8118708 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 197

Conread position: 14-269
Cow position: chr2:11159214-11158953 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 14-269
Cow position: chr2:12224401-12224135 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 203

Conread position: 14-269
Cow position: chr2:22077690-22077951 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 14-269
Cow position: chr2:25030570-25030313 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 45

Conread position: 14-269
Cow position: chr2:28650319-28650059 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 6

Conread position: 14-269
Cow position: chr2:47603339-47603079 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 179

Conread position: 14-269
Cow position: chr2:50077512-50077767 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 45

Conread position: 14-277
Cow position: chr2:76024692-76024950 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 68

Conread position: 16-224
Cow position: chr2:32655266-32655465 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 92

Conread position: 21-193
Cow position: chr2:5963161-5962984 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 145
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 125, 0

Conread position: 22-142
Cow position: chr2:6961380-6961500 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 22-145
Cow position: chr2:37789939-37789815 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 22-199
Cow position: chr2:2451088-2451269 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 133, 72

Conread position: 22-202
Cow position: chr2:67419385-67419198 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 22-242
Cow position: chr2:39421494-39421717 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 131, 79

Conread position: 22-247
Cow position: chr2:54737421-54737651 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 130, 0

Conread position: 22-257
Cow position: chr2:20902628-20902396 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 133, 71

Conread position: 22-258
Cow position: chr2:212307-212066 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-258
Cow position: chr2:5904942-5904705 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 166, 0

Conread position: 22-258
Cow position: chr2:26921600-26921832 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 58

Conread position: 22-258
Cow position: chr2:80955721-80955480 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-263
Cow position: chr2:10268738-10268498 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 177

Conread position: 22-263
Cow position: chr2:53329676-53329922 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-266
Cow position: chr2:28620109-28619868 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 22-268
Cow position: chr2:4403242-4402991 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-268
Cow position: chr2:32066163-32065913 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 165

Conread position: 22-268
Cow position: chr2:72597527-72597774 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 130, 23

Conread position: 22-269
Cow position: chr2:2088258-2088006 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 22-269
Cow position: chr2:2412881-2412629 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 22-269
Cow position: chr2:3324649-3324393 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 22-269
Cow position: chr2:5474431-5474683 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-269
Cow position: chr2:9907828-9908080 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-269
Cow position: chr2:16900171-16900419 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 179

Conread position: 22-269
Cow position: chr2:28793174-28793421 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 178

Conread position: 22-269
Cow position: chr2:36980296-36980548 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 166

Conread position: 22-269
Cow position: chr2:41657098-41657342 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 59

Conread position: 22-269
Cow position: chr2:41686428-41686676 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 105

Conread position: 22-269
Cow position: chr2:47038499-47038247 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 22-269
Cow position: chr2:49472162-49472414 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-269
Cow position: chr2:49590316-49590568 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-269
Cow position: chr2:51990333-51990082 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 23

Conread position: 22-269
Cow position: chr2:52616385-52616636 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 203

Conread position: 22-269
Cow position: chr2:57335111-57335363 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 22-269
Cow position: chr2:57588611-57588863 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 22-269
Cow position: chr2:59413765-59413514 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 17

Conread position: 22-269
Cow position: chr2:78762378-78762613 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 128, 56

Conread position: 22-269
Cow position: chr2:80293032-80292785 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 178

Conread position: 23-201
Cow position: chr2:44091217-44091400 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 129, 0

Conread position: 23-269
Cow position: chr2:13045783-13045537 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 177

Conread position: 24-258
Cow position: chr2:781516-781283 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 130, 82

Conread position: 25-269
Cow position: chr2:175608-175358 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 0

Conread position: 25-269
Cow position: chr2:11729788-11730030 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 109, 15

Conread position: 28-192
Cow position: chr2:1113308-1113144 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 71, 52

Conread position: 30-272
Cow position: chr2:74857158-74857395 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 121, 39

Conread position: 33-272
Cow position: chr2:3502296-3502053 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 62

Conread position: 36-269
Cow position: chr2:63292172-63291932 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 168

Conread position: 40-260
Cow position: chr2:42332922-42332706 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 121, 40

Conread position: 43-221
Cow position: chr2:903967-904146 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 155, 62

Conread position: 59-269
Cow position: chr2:36030388-36030191 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 71-258
Cow position: chr2:15576868-15576677 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 84, 55

Conread position: 73-269
Cow position: chr2:1690944-1691140 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 79, 116

Conread position: 76-269
Cow position: chr2:54485754-54485556 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 79, 0

Conread position: 85-258
Cow position: chr2:34564636-34564460 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 15, 117

Conread position: 88-258
Cow position: chr2:34051153-34051326 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 42

Conread position: 94-269
Cow position: chr2:78742560-78742736 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 61, 107

Conread position: 95-265
Cow position: chr2:41150614-41150781 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 106

Conread position: 108-269
Cow position: chr2:47810848-47811012 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 23, 101

Conread position: 113-269
Cow position: chr2:51617269-51617424 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 74

Conread position: 120-266
Cow position: chr2:365046-364895 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 152-266
Cow position: chr2:12480017-12479903 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.